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. 2013 Nov 6;42(3):1930–1946. doi: 10.1093/nar/gkt1018

Figure 8.

Figure 8.

Predicted secondary structures of zorO mRNA and OrzO indicate the V1 regions are mostly single-stranded. (A) Putative RNA structure of zorO mRNA generated by M-fold (http://http://mfold.rna.albany.edu/?q=mfold/RNA-Folding-Form) (43). The black bracket indicates the region of complementarity to OrzO; red brackets, the putative ribosome binding site; green bracket, the start codon. The black box is the V1 region binding site. (B) Putative RNA structure of OrzO sRNA generated by M-fold (http://mfold.rna.albany.edu/?q=mfold/RNA-Folding-Form) (43). The sequence indicated by the black bracket is the region of complementarity to the zorO mRNA; the black box is the V1 region.