Table 3.
Family/library | miRNA expression levels (reads per million, RPM) | |||
---|---|---|---|---|
Root | Leaf | Flower | Seed | |
miR159 | 40,458.60 | 114,828.36 | 83,771.72 | 31,884.38 |
miR528 | 3,583.11 | 87,059.25 | 15,639.47 | 70,731.99 |
miR535 | 47,988.38 | 41,264.12 | 14,482.89 | 7,607.86 |
miR156 | 2,340.83 | 595.61 | 81.66 | 32,722.32* |
miR166 | 1,788.48 | 1,918.84 | 3,940.71 | 1,489.36 |
miR162 | 2,409.82 | 3,217.41 | 1,521.87 | 423.24 |
miR171 | 29.11 | 1,872.34 | 3,181.79 | 651.13 |
miR167 | 1,683.43 | 3,355.12 | 124.03 | 190.67 |
miR319 | 991.71 | 366.55 | 1,967.85 | 1,280.60 |
miR396 | 612.74 | 2,577.08* | 235.45 | 108.16 |
miR894 | 1,474.60 | 891.75 | 404.37 | 234.64 |
miR164 | 678.36 | 219.74 | 535.33 | 45.58 |
miR408 | 39.56 | 619.38 | 285.27 | 227.61 |
miR168 | 273.53 | 215.00 | 211.21 | 66.78 |
miR5139 | 219.22 | 232.77 | 151.62 | 125.79 |
miR529 | 48.88 | 8.00 | 80.77 | 54.74 |
miR172 | 1.72 | 46.86 | 147.52* | 1.15 |
miR397 | 4.43 | 69.52 | 28.79 | 46.73 |
miR2950 | 47.16 | 50.86 | 49.07 | 1.04 |
miR394 | 5.82 | 10.59 | 25.73 | 14.87 |
miR398 | 1.19 | 38.72* | 6.79 | 2.02 |
miR160 | 5.95 | 14.51 | 22.45 | 2.19 |
miR165 | 9.59 | 7.26 | 12.31 | 1.61 |
miR858 | 0.33 | 0.07 | 24.09* | 0.12 |
miR783 | 6.48 | 8.96 | 4.03 | 0.63 |
miR2911 | 8.14* | 0.52 | 1.34 | 2.25 |
miR1318 | 1.98 | 2.74 | 7.91 | 0.46 |
miR395 | 0.13 | 1.92 | 9.99* | 0.58 |
miR399 | 0.99 | 5.55 | 0.60 | 2.48 |
miR3946 | 5.16 | 2.37 | 0.15 | 0.69 |
The closer the SPM is to 1 the greater the extent of tissue specificity
* Specificity measure (SPM) >0.9