Table 4.

Potential miRNA precursors of conserved miRNA in P. aphrodite

miR family	Precursor ID	Length	Position	MFE (Kcal/mol)	miRNA source	miR family	Precursor ID	Length	Position	MFE (Kcal/mol)	miRNA source
miR156	PATC127202	110	59–168	−66.56	Pa	miR1533	PATC082198	130	41–170	−35	M
miR156	PATC133131	107	217–323	−57.13	P	miR1533	PATC082683	223	1–223	−132.48	M
miR156	PATC135255	107	217–323	−57.13	P	miR-24	PATC178264	125	128–4	−108.57	M
miR156	PATC147904	108	1,193–1,086	−67.86	P	miR-2304	PATC106586	82	86–167	−34.34	M
miR156	PATC164883	107	320–214	−65.99	P	miR-2345	PATC034115	69	253–185	−23.4	M
miR158	PATC050600	219	198–416	−58.22	Mb	miR-2359	PATC166661	114	286–173	−56.45	M
miR159	PATC154123	242	321–80	−105.04	P	miR2361	PATC130801	217	1,659–1,443	−70.66	M
miR160	PATC024352	104	72–175	−52.08	P	miR-2445	PATC093130	125	144–268	−41.74	M
miR160	PATC035616	100	112–13	−50.23	P	miR390	PATC042111	239	239–1	−109.49	M
miR160	PATC069443	106	143–38	−57.97	P	miR394	PATC230021	100	91–190	−44.42	P
miR162	PATC154721	136	1,791–1,656	−64.78	P	miR394	PATC230433	100	94–193	−44.42	P
miR166	PATC143861	140	3,037–2,898	−63.8	P	miR396	PATC130914	101	33–133	−56.23	P
miR167	PATC043563	90	150–61	−45.47	P	miR399	PATC158376	225	1,084–860	−122.48	P
miR167	PATC151450	293	702–410	−109.64	P	miR-3,141	PATC075139	144	188–45	−123.39	M
miR168	PATC138003	96	100–195	−71.34	P	miR-466	PATC091142	135	409–275	−44.66	M
miR168	PATC161629	107	3–109	−61.87	P	miR-466	PATC103125	66	95–30	−41.86	M
miR168	PATC193994	75	47–121	−44.59	P	miR-466	PATC118951	68	420–353	−27.53	M
miR169	PATC114606	108	419–312	−45.4	M	miR-466	PATC120777	55	1–55	−27.43	M
miR169	PATC194844	109	45–153	−54.42	P	miR-466	PATC144413	136	174–39	−35.63	M
miR169	PATC195106	110	72–181	−54.33	P	miR-466	PATC186790	72	140–211	−13.5	M
miR171	PATC106872	118	146–29	−49	P	miR-466	PATC192812	107	37–143	−34.51	M
miR171	PATC151283	99	340–438	−50.89	P	miR-466	PATC155125	74	264–191	−48.23	M
miR171	PATC152062	105	468–364	−49.56	P	miR-466	PATC158916	80	145–66	−34.52	M
miR172	PATC181476	115	149–35	−53.38	P	miR-466	PATC183646	225	1–225	−79.49	M
miR172	PATC101490	86	102–187	−44.61	P	miR-466	PATC226024	90	173–84	−38.95	M
miR-1187	PATC134846	209	66–274	−72.48	M	miR-467	PATC095237	187	203–17	−118.01	M
miR-1187	PATC155430	82	150–231	−30.72	M	miR-4044	PATC035708	96	339–244	−75.66	M
miR-1187	PATC155746	89	407–495	−36.33	M	miR4077	PATC212682	91	39–129	−26.03	M
miR-1187	PATC159725	216	389–174	−62.96	M	miR-4307	PATC113165	78	145–68	−22.02	M
miR-1187	PATC160392	144	349–206	−42.85	M	miR4382	PATC172094	71	150–220	−18.12	M
miR-1187	PATC160599	124	119–242	−53.8	M	miR528	PATC153398	103	13–115	−52.08	P
miR-1187	PATC177152	105	105–1	−36.62	M	miR529	PATC150157	101	1,265–1,165	−43.22	M
miR-1187	PATC217328	87	180–266	−27.25	M	miR535	PATC151754	101	672–772	−54.3	P
miR-1187	PATC218556	95	103–9	−33.69	M	miR535	PATC196028	106	21–126	−62.5	P
miR-1281	PATC081629	204	1–204	−198.14	M	miR-669	PATC082299	94	132–225	−39.8	M
miR1432	PATC023631	89	146–58	−47.02	P	miR-669	PATC230197	70	270–201	−12.72	M
miR1530	PATC178976	119	169–51	−27.78	M	miR845	PATC103597	164	71–234	−44.37	M

^aPrediction based on the P. aphrodite annotated miRNA data of the current study

^bPrediction based on publicly known miRNA sequences in the miRBase