Table 4.
InnateDB analysis of biological processes associated with the genes upregulated in both AR and NR transplant patient samples (compared to healthy controls) taken after 2 or 3 days following transplant.
| PATHWAY NAME | PATHWAY ID | SOURCE NAME | PATHWAY P-VALUE (CORRECTED) |
|---|---|---|---|
| Toll-like receptor signaling pathway | 564 | KEGG | 1.90E-02 |
| Endogenous TLR signaling | 10525 | PID NCI | 1.33E-02 |
| Complement and coagulation cascades | 456 | KEGG | 1.47E-02 |
| Osteoclast differentiation | 10367 | KEGG | 1.31E-02 |
| Hematopoietic cell lineage | 415 | KEGG | 1.85E-02 |
| Cytokine receptor degradation signaling (JAK-STAT pathway and regulation pathway Diagram) | 9939 | INOH | 1.67E-02 |
| Glycogen breakdown (glycogenolysis) | 12814 | REACTOME | 1.86E-02 |
| Regulation of IFNA signaling | 12587 | REACTOME | 1.86E-02 |
| Negative feedback regulation of JAK STAT pathway by (cytokine receptor degradation signaling) | 9645 | INOH | 1.79E-02 |
| NOD-like receptor signaling pathway | 8 112 | KEGG | 3.61E-02 |
| IL1 | 10429 | NETPATH | 4.41E-02 |