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. 2014 Feb 12;5:25. doi: 10.3389/fgene.2014.00025

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Copyright © 2014 Wang, You, Chang, Wang, Wang, Qi and Ma.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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The details of reads mapping and reproducibility of RNA-Seq data. (A) Distribution of aligned reads, which are mapped either uniquely or to multiple positions on the genome. (B) Percentage of reads distributed to exons, introns, and untranslated or intergenic regions. (C) Classification of detected genes by annotated genomic features (percentage: mRNA 0.95; ncRNA 0.01; snoRNA 0.002; tRNA 0.009; miRNA 0.003; snRNA 0.0004; rRNA 0.0005; pesudogene 0.021). (D) Gene expression comparison between the two technical replicates for the inflorescent meristem (IM) stage. (E) Same comparison for flower development stage 1 to stage 9 (F1–9).