Table 6. Least squares ANOVA of parasite resistance characteristics (log transformed fecal egg count, body weight change and packed cell volume change 42 days post challenge at different SNP loci in experimentally challenged sheep (Pampinta and Corriedale, Indonesian Thin Tailed and Indonesian fat tailed).
| SNPID | Chromosome | Fecal egg count | Body Weight | Packed cell volume | |||
| P-Value | FDR* | P-Value | FDR* | P-Value | FDR* | ||
| PIK3R3_498 | 1 | 0.385 | 0.727 | 0.584 | 0.940 | 0.797 | 0.846 |
| LEPR_260 | 1 | 0.937 | 0.998 | 0.161 | 0.516 | 0.741 | 0.844 |
| IL6R_227 | 1 | 0.776 | 0.998 | 0.716 | 0.955 | 0.377 | 0.736 |
| ZDHHC17_190 | 3 | 0.167 | 0.727 | 0.222 | 0.607 | 0.296 | 0.736 |
| NAV3_591 | 3 | 0.038 | 0.604 | 0.561 | 0.940 | 0.046 | 0.313 |
| ACVRL1_445 | 3 | 0.209 | 0.727 | 0.018 | 0.331 | 0.716 | 0.839 |
| FGD6_519 | 3 | 0.299 | 0.727 | 0.596 | 0.940 | 0.704 | 0.839 |
| USP44_252 | 3 | 0.110 | 0.643 | 0.892 | 0.955 | 0.538 | 0.809 |
| ITGA5_111 | 3 | 0.984 | 0.998 | 0.742 | 0.955 | 0.238 | 0.711 |
| GPR84_520 | 3 | 0.317 | 0.727 | 0.024 | 0.331 | 0.062 | 0.317 |
| TARBP2_97 | 3 | 0.506 | 0.830 | 0.045 | 0.463 | 0.055 | 0.317 |
| ITGB7_538 | 3 | 0.890 | 0.998 | 0.795 | 0.955 | 0.315 | 0.736 |
| CSRNP2_65 | 3 | 0.607 | 0.958 | 0.170 | 0.516 | 0.022 | 0.224 |
| SLC11A2_174 | 3 | 0.314 | 0.727 | 0.924 | 0.955 | 0.805 | 0.846 |
| PTPRB_141 | 3 | 0.998 | 0.998 | 0.923 | 0.955 | 0.260 | 0.711 |
| STAT2_486 | 3 | 0.292 | 0.727 | 0.751 | 0.955 | 0.341 | 0.736 |
| DDIT3_527 | 3 | 0.314 | 0.727 | 0.628 | 0.953 | 0.796 | 0.846 |
| GLI1_253 | 3 | 0.344 | 0.727 | 0.267 | 0.684 | 0.105 | 0.432 |
| GLI1_576 | 3 | 0.033 | 0.604 | 0.588 | 0.940 | 0.102 | 0.432 |
| ZBTB39_51 | 3 | 0.062 | 0.604 | 0.066 | 0.516 | 0.637 | 0.839 |
| ANKRD52_113 | 3 | 0.896 | 0.998 | 0.767 | 0.955 | 0.019 | 0.224 |
| ESYT1_157 | 3 | 0.658 | 0.998 | 0.092 | 0.516 | 0.001 | 0.029 |
| TIMP3_716 | 3 | 0.348 | 0.727 | 0.521 | 0.940 | 0.042 | 0.313 |
| CSF2RB_279 | 3 | 0.414 | 0.739 | 0.436 | 0.862 | 0.695 | 0.839 |
| CSF2RB_557 | 3 | 0.270 | 0.727 | 0.976 | 0.976 | 0.672 | 0.839 |
| IL2RB_180 | 3 | 0.390 | 0.727 | 0.151 | 0.516 | 0.699 | 0.839 |
| EM4b_574 | 3 | 0.138 | 0.707 | 0.403 | 0.862 | 0.451 | 0.803 |
| CLEC1A_134 | 3 | 0.924 | 0.998 | 0.441 | 0.862 | 0.325 | 0.736 |
| PTPN6_398 | 3 | 0.965 | 0.998 | 0.916 | 0.955 | 0.255 | 0.711 |
| SMCR7L_517 | 3 | 0.739 | 0.998 | 0.001 | 0.057 | 0.992 | 0.992 |
| IL20RA_422 | 8 | 0.085 | 0.604 | 0.932 | 0.955 | 0.410 | 0.764 |
| STAT5B_385 | 11 | 0.916 | 0.998 | 0.176 | 0.516 | 0.360 | 0.736 |
| STAT3_138 | 11 | 0.990 | 0.998 | 0.764 | 0.955 | 0.537 | 0.809 |
| IL10_82 | 12 | 0.862 | 0.998 | 0.437 | 0.862 | 0.236 | 0.711 |
| TLR5_2276 | 12 | 0.481 | 0.821 | 0.848 | 0.955 | 0.860 | 0.881 |
| PIK3CD_443 | 12 | 0.088 | 0.604 | 0.100 | 0.516 | 0.248 | 0.711 |
| IL2RA_388 | 13 | 0.823 | 0.998 | 0.166 | 0.516 | 0.006 | 0.113 |
| PRLR_341 | 16 | 0.374 | 0.727 | 0.142 | 0.516 | 0.486 | 0.809 |
| PRLR_729 | 16 | 0.955 | 0.998 | 0.822 | 0.955 | 0.509 | 0.809 |
| TLR7_2491 | 27 | 0.069 | 0.604 | 0.335 | 0.808 | 0.572 | 0.809 |
| TLR8_1045 | 27 | 0.313 | 0.727 | 0.106 | 0.516 | 0.572 | 0.809 |
*
FDR – Benjamini-Hochberg False Discovery Rate corrected P-value.