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. 2014 Feb 12;9(2):e88724. doi: 10.1371/journal.pone.0088724

Table 1. Effect of C282Y-HFE on the expression of genes involved in lipoprotein signaling and cholesterol metabolism in human neuroblastoma SH-SY5Y cell lines.

Gene (Gene Symbol) Description Fold changes (C282Y/WT)
APOA2 (APOA2) Apolipoprotein A-II 21.4
APOD (APOD) Apolipoprotein D 161.0
AD2/LPG (APOE) Apolipoprotein E 70.6
Apo-F/DKFZp781G18150 (APOF) Apolipoprotein F 7.1
APOL-II (APOL2) Apolipoprotein L, 2 6.3
BAL/BSDL (CEL) Carboxyl ester lipase (bile salt-stimulated lipase) 5.0
HDLCQ10 (CETP) Cholesteryl ester transfer protein, plasma 8.5
CLP1/NSR2 (COLEC12) Collectin sub-family member 12 177.0
CXCLG16/SR-PSOX (CXCL16) Chemokine (C-X-C motif) ligand 16 305.7
CYP39A1 (CYP39A1) Cytochrome P450, family 39, subfamily A, polypeptide 1 28.8
ELA3 (ELA3) Elastase 3A, pancreatic 38.5
HMGCS2 (HMGCS2) 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (mitochondrial) 4.0
BSF1/IL-4 (IL4) Interleukin 4 7.8
CL-6 (INSIG1) Insulin induced gene 1 5.9
ARH/ARH1 (LDLRAP1) Low density lipoprotein receptor adaptor protein 1 25.4
LRP-DIT/LRPDIT (LRP1B) Low density lipoprotein-related protein 1B (deleted in tumors) 198.2
A2MRAP/A2RAP (LRPAP1) Low density lipoprotein receptor-related protein associated protein 1 5.2
NPC1L1 (NPC1L1) NPC1 (Niemann-Pick disease, type C1, gene)-like 1 332.6
SHP/SHP1 (NR0B2) Nuclear receptor subfamily 0, group B, member 2 30.3
FH/HCHOLA3 (PCSK9) Proprotein convertase subtilisin/kexin type 9 66.5
ACACT/ACAT (SOAT1) Sterol O-acyltransferase 1 4.1
CLEVER-1/FEEL-1 (STAB1) Stabilin 1 8.0
DKFZp434N127 (ZMYND15) Zinc finger, MYND-type containing 15 19.9
CP7B (CYP7B1) Cytochrome P450, family 7, subfamily B, polypeptide 1 -98.1

Pools of total RNA from WT- or C282Y-HFE stably transfected cells were analyzed using the GEArray human target specific gene array (Lipoprotein Signaling & Cholesterol Metabolism). Relative changes in mRNA levels between C282Y cells and WT cells are expressed as fold increase (positive number) or fold decrease (negative number). The average changes in expression (> 4 fold) are shown.