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. 2013 Dec 26;289(7):4145–4160. doi: 10.1074/jbc.M113.521062

TABLE 1.

The effects of chronic RAPA treatment on the cardiac proteins of type 2 diabetic mice

The following 21 positively protein spots were identified by proteomic analysis with 2D-DIGE and MALDI-TOF/TOF, which are differentially expressed among the three groups (wild-type control C57, db/db, and db/db + RAPA). The data are listed according to the high to low fold change ratio of protein abundance between db/db and db/db RAPA hearts. The cutoff ratio of change was ±1.5.

Protein name 2D-DIGE spot Molecular mass (db/db)/wild-type C57 ratio (db/dbRAPA)/(db/db) ratio RAPA effect
kDa
Antioxidant proteins
    Peroxisomal membrane protein 20 (peroxiredoxin 5) 89 17.0 6.48↑ 1.71↑ Induced
    Ferritin heavy chain 1 86 21.1 1.59↑ 1.57↑ Induced

Cytoskeletal/contractile proteins
    Myosin, light polypeptide 2 83 18.9 2.06↑ 1.98↓ Reversed
    Myosin, heavy polypeptide 6α 1 223.4 1.36↓ 1.81↑ Reversed
    Nebulette 13 101.1 1.09↑ 1.78↑ Induced
    Myosin-binding protein C 7 140.5 1.62↓ 1.50↑ Reversed

Glucose metabolism proteins
    Pgm2 33 63.4 1.40↓ 2.24↑ Induced
    Pyruvate dehydrogenase E1α 59 43.2 1.02↑ 1.71↓ Reduced
    PYGB 11,12 67.0 1.01, 1.03↓ 1.7, 2.7↑ Induced

Proteins with other functions
    α-Fetoprotein 25 47.2 1.32↓ 3.09↑ Induced
    Fibrinogen-γ 41,42 49.3 1.84↑, 1.11↓ 2.22, 2.08↑ Induced
    Fibrinogen-α 36 63 1.49↓ 2.38↑ Induced
    Fibrinogen-β 39,40 54.7 1.32↓, 1.3↑ 1.86, 2.35↑ Induced
    Carbonic anhydrase I 75 28.3 1.38↑ 1.96↑ Induced
    Carbonic anhydrase II 72 29 1.03↑ 2.2↑ Induced
    Hemoglobin-β 94 15.6 1.79↑ 1.99↑ Induced
    Heat shock protein β-7 87 18.6 1.34↑ 1.92↓ Reduced
    Serine (or cysteine) proteinase inhibitor 26 46.6 1.81↓ 1.9↓ Reduced
    Transferrin 19 76.6 1.43↓ 1.55↑ Induced
    Pantothenate kinase 4 18 86.3 1.02↓ 1.52↑ Induced
    Prolyl 4-hydroxylase β 27 58.9 1.85↓ 1.5↑ Induced