Figure 4.
Association analysis results in the CEGEC population for the immunochip SNPs in the PTPRK–THEMIS genomic region (chr6: 128.0–128.4 kb). SNP distribution, location of the genes and log10 of nominal P-values of an allelic test are shown. SNPs that were analyzed in tissue sample donors include variants that had shown the strongest association with CD in the GWAS3 and the overall immunochip project4 (black diamonds) and top SNPs from this study (black circles), except for rs9402010, for which a Taqman allelic discrimination assay could not be designed and was replaced by rs9491896.