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. 2013 Oct 8;21(1):69–84. doi: 10.1093/dnares/dst042

Table 2.

Assembly statistics of Porteresia transcriptome

Total reads 374 759 624
Total transcripts 152 367
Size (Mb) 120.99
Minimum transcript length (bp) 200
Maximum transcript length (bp) 14 945
Average transcript length (bp) 794.07
N50 length (bp) 1249
Total reads used for assembly 95.62%
Average read depth 2352
Transcripts with significant hitsa 48 048 (31.5%)
Rice proteins with significant hitb 21 499 (55.06%)
Rice proteins with ≥70% coveragec 9114 (23.34%)

aNumber of transcripts showing a significant hit (E-value ≤ 1e−5) with rice proteins.

bNumber of rice proteins showing a significant hit (E-value ≤ 1e−5) with Porteresia transcripts.

cNumber of rice proteins that showed ≥70% coverage.