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. 2013 Sep 9;4(8):671–685. doi: 10.4161/viru.26288

Table 2. Similarity matrix created by Gegenees over a set of 22 Bacillus strains used in this study.

Organism 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
1. B. anthracis Vollum 100 100 100 95 95 93 94 94 93 91 91 84 83 81 74 73 74 73 70 68 69 56
2. B. anthracis Sterne 100 100 100 95 95 93 95 94 93 91 91 84 84 82 74 74 74 74 71 68 69 57
3. B. anthracis CNEVA9066 100 100 100 95 95 93 94 94 93 91 91 84 83 81 74 74 74 73 71 68 69 57
4. B. thuringiensis BGSC 4AJ1 94 95 94 100 95 93 93 93 92 91 90 83 83 81 74 73 74 73 70 68 68 55
5. B. thuringiensis BGSC 4BA1 95 95 95 95 100 93 93 94 92 91 91 83 83 81 74 73 74 73 72 68 68 56
6. B. thuringiensis 97–27 92 93 93 93 93 100 92 93 92 91 91 83 83 82 74 73 74 74 71 68 69 57
7. B. thuringiensis BGSC 4CC1 93 94 94 93 93 92 100 92 92 90 90 83 83 81 74 73 74 73 70 68 68 56
8. B. thuringiensis BGSC 4AW1 93 94 94 94 94 93 93 100 93 91 91 83 83 81 74 73 74 73 70 68 68 56
9. B. cereus NVH0597–99 92 92 92 92 92 92 92 93 100 91 91 83 83 81 74 73 74 73 71 69 69 57
10. B. cereus SJ1 91 91 91 91 91 91 91 91 91 100 91 83 83 82 74 73 74 73 70 68 68 56
11. B. cereus BGSC 6E1 91 91 91 91 91 91 91 91 91 91 100 83 83 81 74 73 74 73 70 68 68 56
12. B. cereus 4342 83 84 84 84 83 83 84 83 83 83 83 100 94 83 75 74 75 74 71 68 69 56
13. B. thuringiensis BGSC 4Y1 83 83 83 83 83 83 83 83 83 83 83 94 100 83 75 74 74 74 71 68 68 56
14. B. cereus ATCC 10987 81 81 81 81 81 82 81 81 81 81 81 83 83 100 74 73 73 73 70 68 68 57
15. B. cereus ATCC 14579 74 74 74 74 74 74 74 74 74 74 74 75 75 74 100 89 88 89 83 69 69 57
16. B. cereus ATCC 10876 73 73 73 73 73 74 73 73 73 73 73 74 74 73 89 100 88 86 82 68 68 56
17. B. thuringiensis BGSC 4BD1 74 74 74 74 74 74 74 74 74 74 74 74 74 73 88 88 100 85 81 69 69 55
18. B. thuringiensis ATCC 10792 73 73 73 73 73 73 73 73 73 73 73 74 74 73 88 86 85 100 83 68 68 56
19. B. thuringiensis ATCC 35646 71 71 71 71 73 71 71 71 71 71 71 72 72 71 84 83 83 85 100 67 67 54
20. B. mycoides ATCC 6462 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 66 100 91 56
21. B. weihenstephanensis KBAB4 68 69 68 68 68 68 68 68 68 68 68 69 68 68 69 68 68 68 66 91 100 58
22. B. pseudomycoides DSM 12442 55 56 56 55 56 56 55 56 55 56 55 56 56 56 56 55 56 56 53 56 57 100

Anthrax and its close neighbors are indicated in bold. The phylogenomic overview is based on average genomic core genome similarity values.