Table 2. Example genotype to phenotype translations.
Translation entries exist for all encountered genotype combinations and phenotype categories as below, which ultimately drive decision support. There are a total of 971 unique, observed diplotype genotype entries currently, mapping to 19 phenotypes.
Gene name(s) | Raw Genotype Result | Simplified Genotype | Phenotype | |
---|---|---|---|---|
Phenotype Category | Phenotype Detail | |||
CYP2C19 | (*17 VAR) | *17/*17 | Clopidogrel Sensitivity | rapid metabolizer |
CYP2C19 | (*4 VAR) | *4/*4# | Clopidogrel Sensitivity | poor metabolizer |
SLCO1B1 | *1A/*1A | *1/*1 | Simvastatin Sensitivity | normal risk |
SLCO1B1 | *1B HET;(*2 HET);*5 HET | *1/*5 | Simvastatin Sensitivity | intermediate risk |
VKORC/CYP2C9 | VKORC1 -1639G>A No Call, CYP2C9 *1A/*1A | VKORC1 indeterminate; CYP2C9 *1/*1 | Warfarin Sensitivity | normal responder |
VKORC/CYP2C9 | VKORC1 -1639G>A No Call, CYP2C9 *2 HET;(*11 HET);*15 No Call | VKORC1 indeterminate; CYP2C9 *1/*2 | Warfarin Sensitivity | hyper responder |
VKORC/CYP2C9 | VKORC1 c.-1639 VAR, CYP2C9 *2 HET | VKORC1 -1639 AA; CYP2C9 *1/*2 | Warfarin Sensitivity | hyper responder |
VKORC/CYP2C9 | VKORC1 NMD, CYP2C9 *2 No Call | VKORC1 -1639 GG; CYP2C9 indeterminate | Warfarin Sensitivity | indeterminate |
denotes a Rare Variant