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. 2014 Jan 29;2014:327306. doi: 10.1155/2014/327306

Table 4.

Top 20 descriptors of 4-mer motifs. Top 20 descriptors of the 4-mer motifs are contained in the reference set of 167 DNASDs. The descriptors of the TATA motif are ranked at the 199th and 98th when applied for the HPL and DPL datasets, respectively.

Rank HPL dataset DPL dataset
4-mer motif Score Included (m = 99) 4-mer motif Score Included (m = 74)
1 TGAA 1000 + AAAG 1000 +
2 TGAT 941 + AAGA 956 +
3 CCGG 878 TTCG 948 +
4 TATG 843 + AGAA 922
5 TGGA 817 GAAA 866
6 GATG 770 + AAGG 791 +
7 TCAA 739 + CGCC 787
8 TACA 702 + AGAT 777
9 AGGC 697 AATA 759
10 ATGA 694 + TCGC 747
11 TTGA 672 + TGAT 744 +
12 CGGC 662 TGAA 732
13 CAGG 651 ATCG 732 +
14 ATGT 634 TCGA 724 +
15 AGCG 633 CGGT 724
16 CGCG 629 ATAA 712 +
17 AGCC 618 CGAT 710
18 TCAT 595 CGCG 703
19 GAGC 592 + GAAG 699 +
20 AGGG 582 ATAG 697
25 AAGT 642
199 TATA 111 98 TATA 365

+: included in the set of m DNASDs.

−: not included in the set of m DNASDs.