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. 2011 Jul 13;2(3):449–501. doi: 10.3390/genes2030449

Table 1.

Table 1/A Proportion of Swiss-Prot sequences of Metazoan species that differ in DA from their human Swiss-Prot ortholog.
Species* Database Orthologous pairs Orthologous Pairs with Different DA Percent of Pairs with Different DA
Pongo abelii Swiss-Prot 2156 6 0,3
Mus musculus Swiss-Prot 14522 167 1,1
Gallus gallus Swiss-Prot 1799 54 3
Xenopus tropicalis Swiss-Prot 1371 13 0,9
Danio rerio Swiss-Prot 1961 42 2,1
Drosophila melanogaster Swiss-Prot 1038 50 4,8
Caenorhabditis elegans Swiss-Prot 852 50 5,9
*The species are listed in the order of increasing evolutionary distance from Homo sapiens.
Table 1/B Proportion of TrEMBL sequences of Metazoan species that differ in DA from their human Swiss-Prot equivalent/ortholog.
Species* Database Pairs Pairs with Different DA Percent of Pairs with Different DA
Homo sapiens TrEMBL 13699 659 4,81
Mus musculus TrEMBL 12196 489 4,01
Gallus gallus TrEMBL 7055 312 4,42
Xenopus tropicalis TrEMBL 6945 324 4,67
Danio rerio TrEMBL 9001 450 5,00
Drosophila melanogaster TrEMBL 5010 473 9,44
Caenorhabditis elegans TrEMBL 4115 507 12,32
*The species are listed in the order of increasing evolutionary distance from Homo sapiens.
Table 1/C Proportion of RefSeq sequences of Metazoan species that differ in DA from their human Swiss-Prot equivalent/ortholog.
Species* Database Pairs Pairs with Different DA Percent of Pairs with Different DA
Homo sapiens RefSeq 18245 70 0,38
Mus musculus RefSeq 16490 247 1,50
Gallus gallus RefSeq 11584 442 3,82
Xenopus tropicalis RefSeq 7264 224 3,08
Danio rerio RefSeq 12043 571 4,74
Drosophila melanogaster RefSeq 4951 496 10,02
Caenorhabditis elegans RefSeq 5267 575 10,92
*The species are listed in the order of increasing evolutionary distance from Homo sapiens.
Table 1/D Proportion of NCBI's GNOMON predicted sequences of Metazoan species that differ in DA from their human Swiss-Prot equivalent/ortholog.
Species* Database Pairs Pairs with different DA Percent of pairs with different DA
Homo sapiens NCBI 1355 107 7,90
Mus musculus NCBI 2223 165 7,42
Gallus gallus NCBI 11584 404 3,49
Danio rerio NCBI 5630 557 9,89
Drosophila pseudoobscura NCBI 5929 493 8,32
Caenorhabditis briggsae NCBI 5130 612 11,93
*The species are listed in the order of increasing evolutionary distance from Homo sapiens.
Table 1/E Proportion of EnsEMBL sequences of Metazoan species that differ in DA from their human Swiss-Prot equivalent/ortholog.
Species* Database Pairs Pairs with different DA Percent of pairs with different DA
Homo sapiens EnsEMBL 10915 119 1,09
Mus musculus EnsEMBL 16508 259 1,57
Gallus gallus EnsEMBL 11857 462 3,90
Xenopus tropicalis EnsEMBL 11198 645 5,76
Danio rerio EnsEMBL 11596 379 3,27
Drosophila melanogaster EnsEMBL 6072 547 9,01
Caenorhabditis elegans EnsEMBL 5130 553 10,78
*The species are listed in the order of increasing evolutionary distance from Homo sapiens.
Table 1/F Proportion of RefSeq sequences of Metazoan species that differ in DA from their human RefSeq ortholog.
Species* Pairs Pairs with different DA Percent of pairs with different DA
Mus musculus 17207 530 3,08
Gallus gallus 11729 760 6,48
Xenopus tropicalis 7292 394 5,40
Danio rerio 12155 992 8,16
Drosophila melanogaster 4985 849 17,03
Caenorhabditis elegans 5330 835 15,67
*The species are listed in the order of increasing evolutionary distance from Homo sapiens.
Table 1/G Proportion of NCBI's GNOMON predicted sequences of Metazoan species that differ in DA from their human RefSeq equivalent/ortholog.
Species* Pairs Pairs with different DA Percent of pairs with different DA
Mus musculus 2337 217 9,29
Gallus gallus 8274 662 8,00
Danio rerio 5691 809 14,22
Drosophila pseudoobscura 6014 859 14,28
Caenorhabditis briggsae 5195 863 16,61
*

The species are listed in the order of increasing evolutionary distance from Homo sapiens.