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. 2014 Jan 18;15(1):38. doi: 10.1186/1471-2164-15-38

Table 2.

General genome features of Hif KR494 and the reference H. influenzae and Haemophilus spp. strains

H. influenzae H. aegyptius H. haemolyticus H. parainfluenzae
Strain KR494 10810 RD Kw20 3655 ATCC 11116 M21639 ATCC 33392
Serotype f b d nontypeable - - -
GenBank accession CP005967 NC_016809 NC_000907 AAZF01000000 AFBC00000000 AFQR01000000 AEWU01000000
Length (bp) 1856176 1981535 1830138 1878368 1915025 2328161 2110314
Whole genome GC content (%) 38.05 38.14 38.15 38.02 38.08 38.59 39.18
Genes GC content (%) 38.68 38.76 38.83 38.75 39.00 39.33 39.83
Coding content (%) 88.54 87.29 84.66 89.38 90.07 74.29 91.59
Genes avg. length (bp) 913 910.79 935.59 870.79 856 887.6 962.55
Total CDS number 1742 1903 1657 1929 2020 2224 2010
Strain-specific CDS a - 408 199 448 553 773 644
Common CDS b - 1495 1458 1481 1487 1451 1366
Unique CDS in Hif KR494 as compared to the other strains c - 247 284 261 255 292 376

aCDS number of each strain or species that was less conserved (protein sequence <85% similarity) or absent in the Hif KR494 genome.

bCDS number of each strain or species that was conserved and homologous to the Hif KR494 genome (protein sequence ≥85% similarity).

cNumber of CDS in Hif KR494 that were less conserved or absent as compared to the reference genomes (protein sequence <85% similarity).