Table 1.

Top ranked pathways that are regulated (1374 genes) at 25°C by GO analysis.

Rank	Pathway	Pathway annotation	Pathway size	Observed	Ratio	P value
1	Process: metabolic process	rice:GO:0008152	7390	391	0.05	4.3E − 52
2	Process: response to stress	rice:GO:0006950	3620	241	0.07	1.9E − 46
3	Process: response to abiotic stimulus	rice:GO:0009628	2195	177	0.08	1.5E − 44
4	Process: cellular process	rice:GO:0009987	7325	365	0.05	3.3E − 42
5	Function: catalytic activity	rice:GO:0003824	3688	227	0.06	2.7E − 38
6	Component: membrane	rice:GO:0016020	3728	220	0.06	2.1E − 34
7	Process: biosynthetic process	rice:GO:0009058	4673	250	0.05	1.6E − 32
8	Process: response to endogenous stimulus	rice:GO:0009719	1490	118	0.08	4.9E − 29
9	Component: cytosol	rice:GO:0005829	2289	151	0.07	2.1E − 28
10	Process: response to biotic stimulus	rice:GO:0009607	1081	96	0.09	1.9E − 27
11	Component: ribosome	rice:GO:0005840	481	61	0.13	9.5E − 26
12	Function: structural molecule activity	rice:GO:0005198	518	63	0.12	1.5E − 25