Table 2.
Top ranked pathways that are regulated (1374 genes) at 25°C by KEGG analysis.
| Rank | Pathway | Pathway annotation | Pathway size | Observed | Ratio | P value |
|---|---|---|---|---|---|---|
| 1 | Ribosome | rice:osa03010 | 362 | 57 | 0.16 | 5.2E − 29 |
| 2 | Metabolic pathways | rice:osa01100 | 1565 | 119 | 0.08 | 1.0E − 27 |
| 3 | Biosynthesis of secondary metabolites | rice:osa01110 | 745 | 65 | 0.09 | 1.3E − 18 |
| 4 | Starch and sucrose metabolism | rice:osa00500 | 130 | 20 | 0.15 | 5.9E − 11 |
| 5 | Alpha-Linolenic acid metabolism | rice:osa00592 | 34 | 9 | 0.26 | 8.7E − 08 |
| 6 | Glyoxylate and dicarboxylate metabolism | rice:osa00630 | 62 | 11 | 0.18 | 2.6E − 7 |
| 7 | Carbon fixation in photosynthetic organisms | rice:osa00710 | 85 | 12 | 0.14 | 9.6E − 07 |
| 8 | Diterpenoid biosynthesis | rice:osa00904 | 24 | 7 | 0.29 | 1.2E − 06 |
| 9 | Photosynthesis | rice:osa00195 | 148 | 15 | 0.10 | 3.2E − 06 |
| 10 | Plant hormone signal transduction | rice:osa04075 | 150 | 14 | 0.09 | 1.6E − 05 |
| 11 | Biosynthesis of unsaturated fatty acids | rice:osa01040 | 44 | 7 | 0.16 | 8.0E − 05 |
| 12 | Phenylpropanoid biosynthesis | rice:osa00940 | 94 | 9 | 0.10 | 4.0E − 04 |