Table 3. Oligonucleotides.
Oligo | Sequence (printed in 5‘-3‘ direction) | Note |
---|---|---|
AIR-3A | GGGGAGGCUG UGGUGAGGG | (1) |
G1U | UGGGAGGCUG UGGUGAGGG | (1) |
C8A | GGGGAGGAUG UGGUGAGGG | (1) |
G17U | GGGGAGGCUG UGGUGAUGG | (1) |
G18U | GGGGAGGCUG UGGUGAGUG | (1) |
DNA library B50 | AATGCTAATACGACTCACTATAGGAAGAAA GAGGTCTGAG ACATTCT–N50–CTTCTGGAGT TGACGTTGCT T | (2) |
T7 primer B50 | AATGCTAATACGACTCACTATAGGAAGAAA GAGGTCTGAG ACATT | (2) |
RT primer B50 | AAGCAACGTCAACTCCAGAAG | (2) |
G2U-rev | CCCTCACCAC AGCCTCCACT ATAGTGAGTC GTATTAATAC GACTC | (3) |
G3U-rev | CCCTCACCAC AGCCTCACCT ATAGTGAGTC GTATTAATAC GACTC | (3) |
G4U-rev | CCCTCACCAC AGCCTACCCT ATAGTGAGTC GTATTAATAC GACTC | (3) |
A5U-rev | CCCTCACCAC AGCCACCCCT ATAGTGAGTC GTATTAATAC GACTC | (3) |
G6U-rev | CCCTCACCAC AGCATCCCCT ATAGTGAGTC GTATTAATAC GACTC | (3) |
G7U-rev | CCCTCACCAC AGACTCCCCT ATAGTGAGTC GTATTAATAC GACTC | (3) |
U9A-rev | CCCTCACCAC TGCCTCCCCT ATAGTGAGTC GTATTAATAC GACTC | (3) |
G10U-rev | CCCTCACCAA AGCCTCCCCT ATAGTGAGTC GTATTAATAC GACTC | (3) |
U11A-rev | CCCTCACCTC AGCCTCCCCT ATAGTGAGTC GTATTAATAC GACTC | (3) |
G12U-rev | CCCTCACAAC AGCCTCCCCT ATAGTGAGTC GTATTAATAC GACTC | (3) |
G13U-rev | CCCTCAACAC AGCCTCCCCT ATAGTGAGTC GTATTAATAC GACTC | (3) |
U14A-rev | CCCTCTCCAC AGCCTCCCCT ATAGTGAGTC GTATTAATAC GACTC | (3) |
G15U-rev | CCCTAACCAC AGCCTCCCCT ATAGTGAGTC GTATTAATAC GACTC | (3) |
A16U-rev | CCCACACCAC AGCCTCCCCT ATAGTGAGTC GTATTAATAC GACTC | (3) |
G19U-rev | ACCTCACCAC AGCCTCCCCT ATAGTGAGTC GTATTAATAC GACTC | (3) |
(-G19)-rev | CCTCACCACA GCCTCCCCTA TAGTGAGTCG TATTAATACG ACTC | (3) |
FAIR-6 | CCCACTCCAC ATCCACCCCT ATAGTGAGTC GTATTAATAC GACTC | (3) |
FAIR-6_G18U | CACACTCCAC ATCCACCCCT ATAGTGAGTC GTATTAATAC GACTC | (3) |
(1) All RNAs were synthesized and purified by IBA. (2) DNA library B50, containing 50 randomized nucleotides (N50), corresponding primers were purchased from Metabion. The T7 promoter region is underlined. (3) All additionally listed ssDNAs were purchased from Life Technologies GmbH.