Table 1. DAVID functional annotation clustering of villin-hPepT1 and FVB WT at the basal level.
Annotation cluster | Enrichment score | Enriched functional group gene annotation/function | Total gene count |
1 | 4.77 | Transcription and Transcription regulation | 144 |
Nucleus | 128 | ||
DNA – binding | 54 | ||
2 | 3.31 | Isopeptide bond | 18 |
Ubl conjugation | 27 | ||
Cross-links: glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO) | 10 | ||
3 | 2.17 | Nucleotide-binding | 64 |
atp-binding | 51 | ||
Transferase | 53 | ||
Kinase | 28 | ||
Domain: protein kinase | 22 | ||
Binding site: ATP | 24 | ||
Nucleotide phosphate-binding region: ATP | 35 | ||
Serine/threonine-protein kinase | 17 | ||
Active site: protein acceptor | 24 | ||
4 | 2.05 | Golgi apparatus | 28 |
Topological domain: Lumenal | 20 | ||
glycosyltransferase | 11 | ||
Signal-anchor | 17 | ||
5 | 2 | Domain:W2 | 5 |
Initiation factor | 4 | ||
Protein biosynthesis | 5 | ||
6 | 1.83 | Repeat: LDL-receptor class B1–20 | 71 |
Repeat: LDL-receptor class A1–8 | 27 | ||
Domain: EGF-like1–8 | 45 | ||
Domain: EGF-like 2;calcium binding | 3 | ||
Endocytosis | 6 | ||
Short sequence modif: Endocytosis signal | 3 | ||
7 | 1.56 | Nucleotide binding | 6 |
P-Loop | 6 | ||
GTP binding | 4 | ||
8 | 1.37 | Calcium and calcium binding region 1–2 | 41 |
Domain: EF-hand 1–3 | 24 | ||
9 | 1.35 | Cell division | 13 |
Cell cycle | 19 | ||
Mitosis | 8 | ||
10 | 1.12 | Short sequence motif: DEAD box | 4 |
Short sequence motif: Q box | 4 | ||
Domain: Helicase C-terminal | 6 | ||
Domain: Helicase ATP binding | 6 | ||
Helicase | 6 | ||
11 | 1.1 | Domain: WW 1–3 | 9 |
The common proteins were clustered into 30 groups, but based on enrichment score >1.0. 11 groups were considered to be the potential targets with a total of 1100 genes.