Table 6.
Results for predicted Sub. Loc. with proxy
| Disulfide bonding state | ||||
|---|---|---|---|---|
|
Experiment |
Q
|
P
|
R
|
F
1
|
| Raw predictions |
0.804 ± 0.03 |
0.720 ± 0.06 |
0.917 ± 0.04 |
0.811 ± 0.04 |
| Dis. + Met. |
0.838 ± 0.03 |
0.776 ± 0.04 |
0.912 ± 0.04 |
0.838 ± 0.04 |
| Dis. + Loc. |
0.803 ± 0.03 |
0.727 ± 0.05 |
0.922 ± 0.04 |
0.811 ± 0.04 |
| Dis. + Met. + Loc. |
0.846 ± 0.03 |
0.784 ± 0.04 |
0.918 ± 0.04 |
0.845 ± 0.04 |
| HMSVM |
0.882 ± 0.03 |
0.890 ± 0.05 |
0.856 ± 0.04 |
0.872 ± 0.04 |
| BRNN |
0.884 ± 0.03 |
0.895 ± 0.03 |
0.847 ± 0.05 |
0.870 ± 0.03 |
|
Metal bonding state | ||||
|
Experiment |
Q |
P |
R |
F1 |
| Raw predictions |
0.952 ± 0.02 |
0.686 ± 0.09 |
0.827 ± 0.10 |
0.747 ± 0.09 |
| Dis. + Met. |
0.952 ± 0.02 |
0.696 ± 0.08 |
0.795 ± 0.11 |
0.739 ± 0.08 |
| Dis. + Loc. |
– |
– |
– |
– |
| Dis. + Met. + Loc. |
0.952 ± 0.02 |
0.706 ± 0.08 |
0.782 ± 0.10 |
0.735 ± 0.06 |
| HMSVM |
0.952 ± 0.02 |
0.755 ± 0.07 |
0.707 ± 0.09 |
0.725 ± 0.06 |
| BRNN |
0.950 ± 0.02 |
0.694 ± 0.09 |
0.768 ± 0.11 |
0.723 ± 0.08 |
|
Subcellular localization | ||||
| Raw predictions | ||||
| |
Cytosol |
ExtraCell. |
Mitoch. |
Nucleus |
| Cytosol |
14 |
11 |
2 |
5 |
| ExtraCell. |
17 |
206 |
2 |
29 |
| Mitoch. |
12 |
8 |
6 |
8 |
| Nucleus |
46 |
67 |
15 |
78 |
| Dis. + Loc. | ||||
| Cytosol |
13 |
13 |
2 |
4 |
| ExtraCell. |
22 |
224 |
0 |
8 |
| Mitoch. |
12 |
6 |
8 |
8 |
| Nucleus |
61 |
56 |
14 |
75 |
| Dis. + Met. + Loc. | ||||
| Cytosol |
14 |
12 |
2 |
4 |
| ExtraCell. |
22 |
224 |
0 |
8 |
| Mitoch. |
12 |
6 |
8 |
8 |
| Nucleus | 67 | 41 | 17 | 81 |