Table 2. A cross-table representing the relation between proteins and domains associated with S. pombe in the Riley dataset.
Objects = Proteins (uid) | Domain Freq. | ||||||||||
10 | 1076 | 136 | 16 | 275 | 353 | 620 | 659 | 683 | 949 | ||
Attributes = Domains | |||||||||||
APSES | x | 1 | |||||||||
Ank | x | 1 | |||||||||
Cyclin_C | x | 1 | |||||||||
Cyclin_N | x | x | 2 | ||||||||
PBD | x | 1 | |||||||||
Pfam-B_106217 | x | 1 | |||||||||
Pfam-B_2441 | x | 1 | |||||||||
Pfam-B_33993 | x | 1 | |||||||||
Pfam-B_39251 | x | 1 | |||||||||
Pfam-B_45975 | x | 1 | |||||||||
Pfam-B_78326 | x | 1 | |||||||||
Pkinase | x | x | x | x | x | 5 | |||||
RA | x | 1 | |||||||||
Ras | x | 1 | |||||||||
SAM_2 | x | x | 2 | ||||||||
Domains per protein | 1 | 1 | 2 | 4 | 1 | 4 | 2 | 1 | 2 | 3 |
E.g.: the domain set for protein 353, D(353) = {APSES, Ank, Pfam-B_39251, Pfam-B_45975}; and the protein set for domain Pkinase, P(Pkinase) = {10, 1076, 136, 16, 949}.