Skip to main content
. 2014 Jan 22;13:13. doi: 10.1186/1475-2859-13-13

Table 3.

Primers used in this article

Primer Sequence (5′-3′) Description Expected size (bp)
OriTF
GCCAGCTCGTCGGTGTAGC
OriT
700
OriTR
CAACAACGTTGCCCGGATCG
ZF
TGCACTGCAGCAAGACACTGTGAAGGC
RepA and its flanking sequences
2100
ZR
GATTCATTATAACCACGGATCCCTGCCTTTAAGATTTG
EmCFB
CAAATCTTAAAGGCAGGGATCCGTGGTTATAATGAATC
EmR in pOriT-4Em
825
EmC
GGACTAGTGTTAAGGGATGCAGTTTATG
UPF
ACGCGTCGACGTATGGTGCTGCTGATAACAGC
Upstream homologous fragment of epsT
834
UPR
CGCGGATCCCAGTGTGAGTAGCACCTCAC
DnF
CGGGATCCGTGAAAATGCGTACTAA
Downstream homologous fragment of epsT
830
DnR
CATTATAACCACTCTAGACCACTAAAGTTATCG
EmF
CGATAACTTTAGTGGTCTAGAGTGGTTATAATG
EmR in pMT
825
EmR
CTAGCTAGCGTTAAGGGATGCAGTTTATG
sacbF
CATGCCATGGCACATATACCTGCCGTTCAC
sacB
1900
sacBR
CCGGGCCCAATGCCAATAGGATATCGGC
TyzF
GACGATGAATGGAGTGGTAAGATAG
Confirmation of the second recombination 3400a
TyzR CTCCAATCATGCTGCCATGTTGC 2000b

athe size of the wild type.

bthe size of the deleted mutant.