Table 5. In-silico functional prediction of critical variants of ABCB1 SNPs.
SNP | FunctionalCategory | Prediction tool | Prediction effect | FS score |
rs1128503 | Splicingregulation | ESEfinder | Not changed | 0.407 |
ESRSearch | Changed | |||
PESX | Changed | |||
RESCUE ESE | Changed | |||
rs2032582 | Proteincoding | PolyPhen | Benign | 0.418 |
SIFT | No prediction | |||
SNPeffect | Deleterious | |||
LS-SNP | Deleterious | |||
SNPs3D | Deleterious | |||
Ensembl-NS | Nonsynonymous | |||
Splicingregulation | ESEfinder | Changed | ||
ESRSearch | Changed | |||
PESX | Not changed | |||
RESCUE ESE | Not changed | |||
Posttranslation | KinasePhos | Not exist | ||
OGPET | Exist | |||
Sulfinator | Not exist | |||
rs1045642 | Proteincoding | PolyPhen | Benign | 0.528 |
SIFT | Tolerated | |||
SNPeffect | Benign | |||
LS-SNP | Benign | |||
SNPs3D | Deleterious | |||
Ensembl-NS | Nonsynonymous | |||
Splicingregulation | ESEfinder | Changed | ||
ESRSearch | Changed | |||
PESX | Changed | |||
RESCUE ESE | Not changed | |||
Posttranslation | KinasePhos | Not exist | ||
OGPET | Not exist |
FS Score; Functional significance score.