Table 1.
General features of C. pecorum PV3056/3, P787 and W73 compared with the type strain E58 [CP002608]
| C. pecorum (PV3056/3) | C. pecorum (P787) | C. pecorum (W73) | C. pecorum (E58) [ [23] ] | |
|---|---|---|---|---|
| Date of isolation | 1991 | 1977 | 1989 | Circa 1940 |
| Country | Italy | Scotland | Northern Ireland | USA |
| Source | Cow, cervical swab | Sheep, synovial fluid | Sheep, faeces | Calf, brain |
| Disease pathotype | Metritis | Polyarthritis | Asymptomatic/enteric | Encephylomyelitis |
| Genome size (bp) | 1,104,552 | 1,106,412 | 1,106,534 | 1,106,197 |
| % GC of genome | 41.1 | 41.1 | 41.1 | 41.1 |
| % coding | 91.9 | 92.1 | 92.1 | 91.9 |
| Predicted CDS | 927 | 928 | 928 | 1073 |
| Predicted no. of pseudogenes | 6 | 3 | 3 | 1 |
| No. of CDS with functional assignment | 628 (67.7%) | 629 (67.8%) | 630 (67.9%) | - |
| No. of pmp proteins | 15 | 15 | 15 | 15 |
| No. of tRNA genes | 38 | 38 | 38 | 38 |
| No. of rRNA operons | 1 | 1 | 1 | 1 |
| No. of sRNA molecules | 3 | 3 | 3 | 3 |
| Location of OriC region | 1104229–147 nt (471 nt) | 1106263–147 nt (296 nt) | 1106389–147 nt (295 nt) | 305941–306155 nt (215 nt) |