Table I.
Coordinate Uncertainties for CASP NMR Targets through the Expanded FindCore Process
| Protein ID | Find Core | Initial Iteration | Expanded Core | Edited Core | |||||
|---|---|---|---|---|---|---|---|---|---|
| CASP | PDB | Mean | Crit Val | Mean | Crit Val | Mean | Std Dev | Mean | Std Dev |
| T0655 | 2LUZ | 0.560 | 1.305 | 0.642 | 1.763 | 0.718 | 1.517 | 0.718 | 1.521 |
|
| |||||||||
| T0657 | 2LUL | 0.504 | 1.490 | 0.599 | 2.327 | 0.717 | 1.757 | 0.704 | 1.739 |
|
| |||||||||
| T0662 | 2LTE | 0.706 | 1.839 | 0.782 | 2.532 | 0.871 | 1.604 | 0.870 | 1.601 |
|
| |||||||||
| T0665 | 2LR8 | 0.506 | 1.564 | 0.574 | 2.234 | 0.675 | 1.696 | 0.677 | 1.701 |
|
| |||||||||
| T0668 | 0.557 | 1.810 | 0.719 | 3.235 | 0.939 | 1.813 | 0.939 | 1.813 | |
|
| |||||||||
| T0669 | 2LTL | 0.521 | 1.402 | 0.592 | 1.909 | 0.667 | 1.586 | 0.664 | 1.585 |
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| |||||||||
| T0675 | 2LV2 | 1.010 | 2.855 | 1.100 | 3.551 | 1.150 | 1.530 | 1.143 | 1.521 |
|
| |||||||||
| T0677_A | 0.486 | 1.201 | 0.527 | 1.494 | 0.568 | 1.514 | 0.563 | 1.507 | |
|
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| T0677_B | 0.456 | 1.228 | 0.525 | 1.756 | 0.610 | 1.614 | 0.601 | 1.602 | |
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| T0709 | 0.430 | 1.252 | 0.458 | 1.550 | 0.527 | 1.617 | 0.514 | 1.596 | |
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| T0711 | 0.488 | 1.497 | 0.579 | 2.288 | 0.679 | 1.699 | 0.680 | 1.708 | |
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| T0714 | 2LVC | 0.581 | 1.357 | 0.685 | 1.975 | 0.764 | 1.538 | 0.768 | 1.547 |
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| T0716 | 2LY9 | 0.562 | 1.948 | 0.647 | 2.732 | 0.735 | 1.746 | 0.732 | 1.743 |
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| T0727 | 2LTM | 0.359 | 1.000 | 0.425 | 1.365 | 0.454 | 1.556 | 0.450 | 1.545 |
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| T0729 | 2LU7 | 0.433 | 1.139 | 0.525 | 1.717 | 0.624 | 1.626 | 0.631 | 1.643 |
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| T0731 | 0.884 | 3.010 | 0.957 | 3.806 | 1.030 | 1.665 | 1.030 | 1.667 | |
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| T0751 | 2LVA | 0.823 | 5.899 | 0.806 | 5.805 | 0.806 | 1.932 | 0.801 | 1.920 |
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| |||||||||
| T0754 | 2LV9 | 0.480 | 1.225 | 0.563 | 1.672 | 0.633 | 1.534 | 0.628 | 1.527 |
Coordinate uncertainties (<u2> values, converted to Å) and their means, standard deviations and critical values are calculated, as described in the main text, from each core atom set (and the associated superimposition) produced in the iterated, editing process.