Table 4. Analysis of both determined AGXT2 SNPs with regard to plasma (in µmol/L) and urinary (in µmol/g creatinine) BAIB concentrations.
Plasma BAIB | AGXT2 rs16899974 | AGXT2 rs37369 | |||
WT (c.418 GG) | Hetero (c.418 GA) | Homo (c.418 AA) | |||
WT (c.1492 GG) | 0.92 (0.74–1.13); n = 218 | 1.43 (1.12–1.83); n = 20 | 2.51; n = 1 | p<0.001 | |
Hetero (c.1492 GT) | 1.05 (0.86–1.29); n = 114 | 1.55 (1.16–1.83); n = 22 | 2.31 (1.63–2.78); n = 3 | p<0.001 | |
Homo (c.1492 TT) | 1.08 (0.90–1.60); n = 13 | 2.03 (1.67–2.39); n = 4 | / | p = 0.011 | |
p<0.001 | p = 0.172 | n.d. | |||
Urinary BAIB | AGXT2 rs16899974 | AGXT2 rs37369 | |||
WT (c.418 GG) | Hetero (c.418 GA) | Homo (c.418 AA) | |||
WT (c.1492 GG) | 44.1 (27.9–67.9); n = 218 | 151 (83.1–230); n = 20 | 1036; n = 1 | p<0.001 | |
Hetero (c.1492 GT) | 58.5 (38.6–89.1); n = 116 | 167 (76.9–251); n = 24 | 689 (309–1316); n = 3 | p<0.001 | |
Homo (c.1492 TT) | 111 (51.1–140); n = 13 | 374 (292–587); n = 5 | / | p<0.001 | |
p<0.001 | p = 0.042 | n.d. |
Median values (25–75% percentile) are shown. Both SNPs were significant for plasma and urinary BAIB in two-way ANOVA models using log-transformed data. The p values in the last rows and lower columns are based on nested ANOVA tests of log-transformed data (significant if p<0.025).
AGXT2, alanine-glyoxylate aminotransferase 2; BAIB, β-aminoisobutyrate; Hetero, heterozygous for minor allele; Homo, homozygous for minor allele; n.d., not determined; WT (wild-type), homozygous for major allele.