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. 2013 Sep 18;8(1):99–116. doi: 10.1007/s11693-013-9125-3

Table 1.

Pathway and protein interaction databases

S. No. Database
1 KEGG (Kyoto Encyclopedia of Genes and Genomes)
2 BioCyc Pathway/Genome Databases
3 EMP (The Enzymes and Metabolic Pathways Database)
4 aMAZE (Molecular function, Interaction and biochemical process database)
5 BRENDA (Comprehensive Enzyme Information System)
6 Pathway Hunter Tool
7 Reactome
8 WikiPathways
9 NCI/Nature Pathway Interaction Database
10 BioCarta (Pathway database)
11 Pathway commons
12 HPRD (Human Protein Reference Database)
13 MINT (Molecular INTeraction database)
14 DIP (Database of Interacting Proteins)
15 BIND (Biomolecular Interaction Database)
16 STRING (Functional Protein–Protein Interaction database)
17 Panther (Genes, Proteins and pathway database)

These databases can be resorted to obtain the information on various cellular pathways and biomolecular interactions. The information thus obtained can be used to reconstruct the integrated network