Fig. 5.

Comparison of microsatellite loci containing non-reference alleles identified in two sequence datasets from a single human individual. Two sequencing datasets from blood and saliva samples from a single human individual were used to measure the consistency of genotyping results generated by RepeatSeq, GATK, Dindel and GenoTan. The numbers in the diagrams are the numbers of microsatellite loci containing at least one non-reference allele identified by each program for two different samples. The consistency of the genotyping results generated by each program was measured by (number of consistent calls)/(number of consistent calls + nummber of inconsistent calls)