Table 3.
Nucleotide and/or predicted amino acid (aa) sequence differences for mt protein-coding and ribosomal RNA genes among Chabertia erschowi (CE) and Chabertia ovina China isolate (COC) and Australia isolate (COA)
| Gene |
Nucleotide length (bp) |
Nucleotide difference (%) |
Number of aa |
aa difference (%) |
||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CE | COC | COA | CE/COC | CE/COA | COC/COA | CE | COC | COA | CE/COC | CE/COA | COC/COA | |
|
atp6 |
600 |
600 |
597 |
14.33 |
14.83 |
5.00 |
199 |
199 |
198 |
11.06 |
14.57 |
7.54 |
|
nad1 |
873 |
873 |
873 |
13.63 |
13.97 |
4.35 |
290 |
290 |
290 |
5.17 |
8.62 |
3.79 |
|
nad2 |
840 |
840 |
840 |
19.40 |
20.12 |
3.93 |
279 |
279 |
279 |
17.92 |
17.20 |
2.15 |
|
nad3 |
339 |
336 |
336 |
17.40 |
17.70 |
6.55 |
112 |
112 |
112 |
16.96 |
16.07 |
7.14 |
|
nad4 |
1230 |
1230 |
1233 |
17.64 |
18.82 |
5.43 |
409 |
409 |
410 |
14.67 |
17.80 |
4.88 |
|
nad4L |
234 |
234 |
234 |
11.97 |
12.39 |
4.70 |
77 |
77 |
77 |
7.79 |
7.79 |
0 |
|
nad5 |
1582 |
1582 |
1582 |
17.51 |
17.32 |
4.87 |
527 |
527 |
527 |
14.42 |
13.66 |
2.47 |
|
nad6 |
435 |
432 |
432 |
19.08 |
19.31 |
5.56 |
144 |
143 |
143 |
15.97 |
17.36 |
1.40 |
|
cox1 |
1578 |
1578 |
1578 |
11.98 |
12.86 |
4.06 |
525 |
525 |
525 |
0.57 |
0.57 |
0 |
|
cox2 |
696 |
696 |
696 |
13.36 |
13.65 |
4.89 |
231 |
231 |
231 |
0.87 |
0.87 |
0 |
|
cox3 |
766 |
766 |
771 |
14.75 |
14.01 |
5.06 |
255 |
255 |
256 |
3.14 |
2.35 |
1.17 |
|
cytb |
1113 |
1113 |
1113 |
16.80 |
16.89 |
4.67 |
370 |
370 |
370 |
9.73 |
9.73 |
1.08 |
|
rrnS |
696 |
696 |
700 |
7.33 |
7.71 |
1.86 |
- |
- |
- |
- |
- |
- |
| rrnL | 970 | 962 | 962 | 13.61 | 13.92 | 3.20 | - | - | - | - | - | - |