Table 1. Cloning of amylopullulanase genes from various bacteria.
Organism |
Molecular mass (kDa) |
Host | Remarks | Reference |
---|---|---|---|---|
Bacillus sp KSM-1378 |
211 | E. coli and Bacillus subtilis | The N-terminal and carboxyl-terminal half of the enzyme constitutes the amylase and pullulanase domains, respectively and are separated by a 35 amino acid sequence tandem repeat. Asp550-Glu579-Asp645 and Asp1464-Glu1493-Asp1581 were reported as catalytic triads for the amylase and pullulanase activity, respectively. Transmission electron microscopy of the purified enzyme revealed a “castanetlike” or “bent dumbbell-like” structure. | Hatada et al. 16 |
Bacillus sp strain XAL601 | 220 | E.coli | The α-amylase-pullulanase has been overexpressed in E.coli and was found to be alkaline in nature. The enzyme has been found to adsorb strongly to crystalline cellulose (Avicel) and raw corn starch. was analyzed for its binding efficiency to various carbohydrates and was found to have strong adsorbtion to crystalline cellulose (Avicel) and raw corn starch. | Lee et al.13 |
Bacillus stearothermophilus TS-23 | 223 | E.coli | The expressed gene products obtained were found degenerate with the largest active polypeptide of 220kDa and the smallest one of about 105kDa. | Chen et al.25 |
Clostridium thermohydrosulfur-icum DSM 3783 | 165, 130, 100 |
E.coli | Immunoblotting has revealed more than ten α-amylase-pullulanase specific polypeptides. The largest polypeptide was found to have a molecular weight of about 165kDa, while the smallest enzymatically active polypeptide was about 100kDa. The enzyme was found to be optimally active at 80–85°C, 5°C lower compared with that of the native strain. | Melasniemi and Paloheimo 21 |
Geobacillus ther-moleovorans NP33 | 182 | E.coli | The 300 amino-acid truncation from the C-terminus enhanced the production, specific enzyme activity, thermostability and starch saccharification efficiency. | Nisha and Satyanarayana66 |
Lactobacillus plantarum L137 | 200 |
L. plantarum NCL21 |
The N-terminal and C-terminal region of the enzyme was found to possess amino acid sequence repeats. The truncation of the 100 amino acid repeat region of the C-terminus enhanced the production and specific activity of the enzyme. | Kim et al.35; Kim et al.54 |
Thermoanaerobac-ter ethanolicus 39E | 162 | E. coli | Asp597, Glu626 and Asp703 have been identified as the catalytic triad by hydrophobic cluster analysis and site-directed mutagenesis studies. The enzyme was found to hydrolyze pullulan at an efficient rate compared with other substrates. | Mathupala et al.;12 Lin and Leu39 |
Thermoanaerobac-ter saccharolyti-cum B6A-R1 | 140 | E. coli | Highly conserved amino acid residues of the protein have been identified by hydrophobic cluster analysis and multiple sequence alignment. | Ramesh et al.11 |
Thermoanaerobiu-m brockii | 70–100 | E. coli and Bacillus subtilis | Secretion of enzyme increased from 0.23U/ml (in T. brockii) to 0.80 to 1.0 U/ml, when B. subtilis was used as an expression host. | Coleman et al.10 |