Table 4. Overview of the EMOTE data.

Bioreplicate:	#1	Total reads:	43619821	Reads with Rp5 motif:		41423045
Primer	Strain	# of reads with barcode	# of reads with CC ( = reads included in the analyses)	# of reads mapping to unique positions	# of reads mapping to multiple positions	% of all reads mapping to tRNA	% of all reads mapping to rRNA	% of all reads mapping within ORFs+200 nt upstream	Number of genes with more than 10 mapped reads
D5a	WT	11385677	8231917	122318	5477051	0.86	96.97	2.17	1565
D5b	ΔY	5361790	4625509	63075	2853357	0.49	97.35	2.16	1074
D5c	ΔJ1	5947519	5040905	193442	2471613	0.21	92.51	7.28	1659
D5d	ΔJ2	6415079	5351695	366785	2937292	0.64	88.24	11.12	1976
D5e	ΔJ1ΔJ2	5880549	3956054	191270	2066206	0.39	91.11	8.49	1703
D5f	ΔcshA	6278524	4793096	42131	2694536	0.63	97.84	1.54	1005