Table 7.
Alignment statistics of reads mapped against Arenaviridae genomes
| Platform | Sample Description | Reads Mapped (% Mapped) | Molecular Length (bp) | Total Mapped (bp) |
|---|---|---|---|---|
| HeliScope |
Grand Plaza Bulk 1 |
37 (0.00%) |
25.9 ± 3.4 |
959 |
| |
Grand Plaza Bulk 2 |
24 (0.00%) |
26.9 ± 4.6 |
646 |
| |
Grand Plaza Phos. 1 |
13 (0.00%) |
24.5 ± 0.7 |
319 |
| |
Grand Plaza Phos. 2 |
15 (0.00%) |
26.5 ± 3.8 |
397 |
| |
Churchyard Bulk 1 |
193 (0.00%) |
26.3 ± 3.7 |
5,071 |
| |
Churchyard Bulk 2 |
254 (0.00%) |
26.3 ± 3.4 |
6,673 |
| |
Churchyard Phos. 1 |
65 (0.00%) |
26.3 ± 3.7 |
1,711 |
| |
Churchyard Phos. 2 |
110 (0.00%) |
26.8 ± 4.1 |
2,946 |
| |
Grand Plaza Sheared |
0 (0.00%) |
— |
0 |
| |
Churchyard Sheared |
0 (0.00%) |
— |
0 |
| |
Soil Bulk |
2 (0.00%) |
24. 5 ± 0.7 |
49 |
| |
Soil Sheared |
0 (0.00%) |
— |
0 |
| HiSeq 2500 |
TP04 |
0 (0.00%) |
— |
0 |
| |
TP09 |
0 (0.00%) |
— |
0 |
| |
TP10 |
0 (0.00%) |
— |
0 |
| |
TP18 |
0 (0.00%) |
— |
0 |
| |
TP37 |
0 (0.00%) |
— |
0 |
| |
TP48 |
0 (0.00%) |
— |
0 |
| Soil Bulk | 0 (0.00%) | — | 0 |
“Bulk” samples are the unsheared bulks. “Phos.” samples are the phosphatase-treated unsheared bulks. “Sheared” samples are the sheared bulks. “% Mapped” indicates the percentage of the total number of reads comprised by the reads mapped onto Arenaviridae genomes. “Molecular Length” is the mean length (± standard deviation) of the mapped reads.