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. 2014 Jan 27;20(5-6):899–907. doi: 10.1089/ten.tea.2013.0761

Table 1.

Molecular Beacon and Target Sequences for Reference and Osteogenic mRNA

Gene Beacon sequence 5′→3′
GAPDH27 CGACGGAGTCCTTCCACGATACCACGTCG
ALPL CGCTCCAGAGTGTCTTCCGAGGAGGTCAAGGAGCG
ALPL target TTGACCTCCTCGGAAGACACTCT

Stem regions are underlined. Remainder of oligonucleotide forms the loop region, which is complementary to the gene of interest. A 6-FAM fluorophore and BHQ1 quencher were attached to 5′ and 3′ ends, respectively. ALPL target is the reverse complement of the loop region of the ALPL beacon.