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. Author manuscript; available in PMC: 2014 Mar 3.
Published in final edited form as: Cancer. 2009 Oct 1;115(19):4488–4503. doi: 10.1002/cncr.24491

Table 6.

Comparison between gene genotypes and clinical parameters

gender
Grade
Stage
pN
pM
Gene (SNP ID) Genotype female male p value 1+2 3+4 p value pT1+pT2 pT3+pT4 p value (−) (+) p value (−) (+) p value
n=65 n=145 n=185 n=25 n=159 n=51 n=200 n=10 n=191 n=19
DKK2 (rs17037102) GG 35 70 reference 92 13 reference 79 26 reference 99 6 reference 94 11 reference
GA 24 68 0.27 82 10 0.74 70 22 0.89 89 3 0.41 85 7 0.49
AA 6 7 0.36 11 2 0.76 10 3 0.89 12 1 0.78 12 1 0.75
GA+AA 30 75 0.45 93 12 0.83 80 25 0.87 101 4 0.52 97 8 0.47
DKK2 (rs419558) CC 39 80 reference 107 12 reference 91 28 reference 118 1 reference 113 6 reference
CT 17 46 0.42 56 7 0.83 48 15 0.96 57 6 0.004 54 9 0.03
TT 9 19 0.94 22 6 0.11 20 8 0.58 25 3 0.004 24 4 0.08
CT+TT 26 65 0.51 78 13 0.35 68 23 0.77 82 9 0.002 78 13 0.02
DKK2 (rs447372) GG 39 78 reference 105 12 reference 90 27 reference 116 1 reference 111 6 reference
GA 17 48 0.31 58 7 0.91 49 16 0.82 59 6 0.005 56 9 0.04
AA 9 19 0.91 22 6 0.11 20 8 0.54 25 3 0.004 24 4 0.09
GA+AA 26 67 0.41 80 13 0.41 69 24 0.65 84 9 0.003 80 13 0.03
DKK3 (rs3206824) GG 50 100 reference 136 14 reference 116 34 reference 143 7 reference 138 12 reference
GA 13 40 0.23 43 10 0.06 37 16 0.28 50 3 0.77 46 7 0.26
AA 2 5 0.79 6 1 0.66 6 1 0.61 7 0 7 0
GA+AA 15 45 0.24 49 11 0.07 43 17 0.39 57 3 0.92 53 7 0.41
DKK3 (rs11022095) GG 11 17 reference 25 3 reference 21 7 reference 27 1 reference 23 5 reference
GA 28 60 0.47 76 12 0.68 67 21 0.91 83 5 0.61 80 8 0.21
AA 26 68 0.24 84 10 0.99 71 23 0.95 90 4 0.87 88 6 0.06
GA+AA 54 128 0.31 160 22 0.83 138 44 0.93 173 9 0.75 168 14 0.08
DKK3 (rs1472189) CC 47 108 reference 138 17 reference 119 36 reference 150 5 reference 146 9 reference
CT 16 35 0.89 46 5 0.82 38 13 0.74 46 5 0.05 41 10 0.003
TT 2 2 0.41 1 3 0.0001 2 2 0.21 4 0 4 0
CT+TT 18 37 0.74 47 8 0.48 40 15 0.55 50 5 0.07 45 10 0.005
DKK3 (rs7396187) GG 46 92 reference 127 11 reference 108 30 reference 132 6 reference 127 11 reference
GC 16 42 0.43 46 12 0.01 40 18 0.11 54 4 0.46 51 7 0.36
CC 3 11 0.36 12 2 0.42 11 3 0.92 14 0 13 1 0.92
GC+CC 19 53 0.31 58 14 0.014 51 21 0.14 68 4 0.69 64 8 0.45
DKK3 (rs2291599) CC 34 67 reference 93 8 reference 76 25 reference 95 6 reference 90 11 reference
CT 26 55 0.82 70 11 0.21 62 19 0.84 77 4 0.77 74 7 0.61
TT 5 23 0.11 22 6 0.04 21 7 0.98 28 0 27 1 0.24
CT+TT 31 78 0.41 92 17 0.08 83 26 0.88 105 4 0.44 101 8 0.37
DKK4 (rs2073664) CC 40 104 reference 127 17 reference 107 37 reference 137 7 reference 129 15 reference
CT 18 22 0.03 35 5 0.91 30 10 0.92 37 3 0.52 36 4 0.94
TT 7 19 0.93 23 3 0.96 22 4 0.26 26 0 26 0
CT+TT 25 41 0.14 58 8 0.95 52 14 0.48 63 3 0.92 62 4 0.31
sFRP4 (rs1802073) CC 15 36 reference 42 9 reference 37 14 reference 47 4 reference 43 7 reference
CA 25 57 0.89 70 12 0.64 65 17 0.37 79 3 0.29 76 6 0.21
AA 25 52 0.71 73 4 0.02 57 20 0.85 74 3 0.34 71 6 0.26
CA+AA 50 109 0.78 143 16 0.15 122 37 0.54 153 6 0.24 147 12 0.17
sFRP4 (rs1802074) AA 15 21 reference 32 4 reference 28 8 reference 35 1 reference 35 1 reference
AG 15 54 0.03 65 4 0.33 53 16 0.92 67 2 0.97 64 5 0.35
GG 35 70 0.36 88 17 0.09 78 27 0.68 98 7 0.38 92 13 0.09
AG+GG 50 124 0.13 153 21 0.87 131 43 0.75 165 9 0.54 156 18 0.15
SMAD7 (rs12953717) CC 46 79 reference 108 17 reference 94 31 reference 119 6 reference 111 14 reference
CT 13 55 0.01 61 7 0.51 51 17 0.98 65 3 0.91 65 3 0.11
TT 6 11 0.91 16 1 0.37 14 3 0.52 16 1 0.85 15 2 0.95
CT+TT 19 66 0.03 77 8 0.36 65 20 0.83 81 4 0.97 80 5 0.19
DAAM2 (rs6937133) GG 12 18 reference 26 4 reference 22 8 reference 29 1 reference 26 4 reference
GA 20 45 0.37 59 6 0.54 48 17 0.96 62 3 0.77 56 9 0.95
AA 33 82 0.23 100 15 0.97 89 26 0.64 109 6 0.67 109 6 0.12
GA+AA 53 127 0.25 159 21 0.79 137 43 0.74 171 9 0.69 165 15 0.38
DAAM2 (rs2504106) TT 19 53 reference 64 8 reference 57 15 reference 68 4 reference 66 6 reference
TC 29 55 0.27 73 11 0.71 62 22 0.43 80 4 0.83 73 11 0.34
CC 17 37 0.53 48 6 0.99 40 14 0.51 52 2 0.63 52 2 0.29
TC+CC 46 92 0.31 121 17 0.79 102 36 0.39 132 6 0.69 125 13 0.79

note; Considering multiple comparison,

a

p-value of < 0.05 was regarded as statistically significant