Table 3.
Prediction performance and the numbers of used contacts by β ACV ASA and ACV ASA
| Methods | Distance 1 | #contacts 2 | Precision | Recall | F1 | Accuracy |
|---|---|---|---|---|---|---|
|
β
ACV
ASA
|
|
2,881 |
0.615 |
0.593 |
0.604 |
0.830 |
| ACV
ASA
|
2.9 |
347 |
0.486 |
0.419 |
0.450 |
0.778 |
| |
3.0 |
513 |
0.465 |
0.382 |
0.420 |
0.770 |
| |
3.1 |
715 |
0.394 |
0.302 |
0.342 |
0.747 |
| |
3.2 |
966 |
0.487 |
0.442 |
0.463 |
0.778 |
| |
3.3 |
1,293 |
0.450 |
0.419 |
0.434 |
0.763 |
| |
3.42 |
1,884 |
0.438 |
0.372 |
0.403 |
0.760 |
| |
3.5 |
2,394 |
0.494 |
0.442 |
0.466 |
0.780 |
| |
3.55 |
2,789 |
0.443 |
0.407 |
0.424 |
0.760 |
| |
3.6 |
3,123 |
0.437 |
0.360 |
0.395 |
0.760 |
| |
4 |
7,542 |
0.463 |
0.430 |
0.446 |
0.768 |
| |
4.5 |
15,389 |
0.482 |
0.465 |
0.473 |
0.775 |
| 5 | 26,752 | 0.488 | 0.465 | 0.476 | 0.778 |
1: The spatial distance threshold of two atoms.
2: The number of atomic contacts involving in the 396 mutations, including mutated contacts and new contacts.