Table 3.
Co-localized pairs of aminoacids
| 2 | 3 | 4 | 5 | ||
|---|---|---|---|---|---|
| All + sup35 |
1 |
S-F, G-V |
S-V, Y-N |
S-I, Y-Y, L-Y, I-I |
S-I, Y-Q |
|
2 |
|
F-L, T-V |
V-I, T-I, V-Y, F-I |
R-R, T-I, V-I |
|
|
3 |
|
|
V-I, L-I, N-Y |
V-I, L-V |
|
| 4 | I-I, I-F, Y-R, Y-I |
The co-occurrence pattern obtained with the sliding window of length 5 after training on extended experimental dataset. The first letter of each pair corresponds to the window location indicated by vertical numbers, the second letter to a number indicated horizontally. The table was obtained from data presented in Figure 5 after executing the cut off for the threshold of 0.4.