Table 4.
O. marina EST clusters with top Blastx hits corresponding to known transposable elements
| Cluster ID | Top hit Acc. | Top hit | E-value | ESTs |
|---|---|---|---|---|
| OML00000073 |
XP_002422173 |
Hypothetical protein FOXB_16913 Fusarium oxysporum |
8.00E-27 |
7 |
| OML00000330 |
ABA95820 |
Hypothetical protein FOXB_16913 Fusarium oxysporum |
3.00E-38 |
20 |
| OML00002280 |
ACB59199 |
Copia-like protein [Brassica oleracea] |
7.00E-15 |
3 |
| OML00002762 |
EFY94000 |
Retrotransposon like protein [Metarhizium anisopliae ARSEF 23] |
8.00E-12 |
3 |
| OML00002917 |
ABF93649 |
Retrotransposon protein Ty1-copia subclass [Oryza sativa Japonica group] |
5.00E-18 |
9 |
| OML00002925 |
CAB46043 |
Retrotransposon like protein [Arabidopsis thaliana] |
4.00E-16 |
5 |
| OML00004005 |
BAB01972 |
Copia-like retrotransposable element [Arabidopsis thaliana] |
2.00E-10 |
12 |
| OML00004886 |
AAD32898 |
Putative retroelement pol polyprotein [Arabidopsis thaliana] |
1.00E-16 |
1 |
| OML00005041 |
AAP46257 |
Putative polyprotein [Oryza sativa Japonica Group] |
8.00E-15 |
4 |
| OML00006583 |
BAB01972 |
Copia-like retrotransposable element [Arabidopsis thaliana] |
6.00E-12 |
8 |
| OML00009617 |
XP_003376336 |
Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trichinella spiralis] |
2.00E-13 |
11 |
| OML00010486 |
EGU73258 |
Hypothetical protein FOXB_16913 Fusarium oxysporum |
2.00E-21 |
6 |
| OML00010490 |
BAB01972 |
Copia-like retrotransposable element [Arabidopsis thaliana] |
3.00E-12 |
5 |
| OML00010499 |
ABA95820 |
Retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] |
1.00E-21 |
3 |
| Total | 97 | |||