Table 1. List of Hsf genes involved in different abiotic stress conditions and development of barley.
Name | HarvESTID | Fl_cDNA ID | Affymetrix ID | Full/partial | ORF (bp) | Protein (AA) | M.wt (kDa) | pI | Intron | Chromosome Localization | Morex/Bac contig_ID | 5′ upstream region (bp) | Predicted localization |
HvHsfA1a | 35_17839 | AK354917 | Contig8225_at | Full | 1533 | 510 | 56.58 | 5 | HVVMRX83KhA 0005M16_v61_c1 | 2007 | Nucleus | ||
HvHsfA2a | 35_7894 | AK377082 | Contig18295_at | Full | 1116 | 371 | 41.08 | 5.61 | 1(77) | 4 | Contig_2161641 | 854 | Nucleus |
HvHsfA2b | 35_9896 | AK359122 | Full | 1257 | 418 | 46.06 | 4.82 | 1(2446) | 2 | Contig_40049 | Nucleus | ||
HvHsfA2c | 35_28323 | AK363263 | Full | 1119 | 372 | 42.11 | 4.9 | 1(891) | 1 | HVVMRX83KhA 0052F09_v62_c1 | 2094 | Nucleus | |
HvHsfA2d | 35_48033 | AK364288 | rbaal35o24_at | Partial | 4 | Contig_5993 | Nucleus | ||||||
HvHsfA2e | 35_23711 | AK358148 | Full | 1083 | 360 | 40.24 | 5.65 | 2 | Contig_2162221 | Nucleus | |||
HvHsfA2f | AK372701 | Full | 1053 | 350 | 37.98 | 4.64 | 4 | Nucleus | |||||
HvHsfA4b | 35_8623 | AK371121 | Contig23893_at | Full | 1299 | 432 | 48.54 | 5.41 | 1(543) | 3 | Contig_41104 | Nucleus | |
HvHsfA4d | 35_9620 | AK362315 | Contig18961_at | Full | 1296 | 431 | 48.72 | 5.41 | 1(174) | 1 | Contig_1009401 | 2030 | Nucleus |
HvHsfA3 | 35_41834 | HM446028 | Full | 1488 | 495 | 54.18 | 6.01 | 1(1050) | 2 | Contig_53615 | 1120 | Nucleus | |
HvHsfA5 | 35_9627 | AK355564 | Contig18870_at | Full | 1374 | 457 | 50.17 | 5.51 | 1(1064) | 6 | HVVMRXALLh A0687I07_v22_c1 | 1986 | Nucleus |
HvHsfA9 | 35_18881 | AK362997 | Contig10108_s_at | Partial | 7 | Nucleus | |||||||
HHsfC1b | 35_36864 | AK353849 | HB03A08_T3_at | Full | 708 | 235 | 26.07 | 7.4 | 1(97) | 4 | Contig_1017877 | 798 | Nucleus |
HvHsfB1 | AK366231 | Partial | 4 | Nucleus | |||||||||
HvHsfB2a | 35_38788 | AK357873 | Full | 900 | 299 | 32.48 | 5.15 | 2 | Nucleus | ||||
HvHsfB2b | 35_6843 | AK373036 | Contig18148_at | Full | 1173 | 390 | 41.88 | 5.53 | 7 | Contig_49614 | Nucleus | ||
HvHsfB2c | 35_18576 | AK354133 | HV_CEa0014 A18r2_at | Full | 1209 | 402 | 41.74 | 4.78 | 7 | Nucleus | |||
HvHsfB4b | AK376881 | Full | 951 | 316 | 34.69 | 7.11 | 2 | Nucleus | |||||
HvHsfB4c | 35_31994 | AK356002 | Full | 1167 | 388 | 41.42 | 7.96 | 2 | Contig_221980 | Nucleus | |||
HvHsfC1a | 35_26831 | CB860849 | Partial | 1(202) | 4 | Contig_61089 | 2030 | Nucleus | |||||
HvHsfC2a | AK369002 | Full | 801 | 266 | 29.48 | 5.86 | 4 | HVVMRXALLhA 0053M06_v10_c1 | 2055 | Nucleus | |||
HvHsfC2b | 35_16479 | AK354435 | Contig6968_at | Full | 801 | 266 | 28.27 | 6.35 | 7 | Contig_57251 | Nucleus |
The table shows the following details: Harvest unigene ID, full-length cDNA ID, Affymetrix ID, full-length/partial, open reading frame (ORF) size, predicted molecular mass for the deduced proteins, isoelectricpoint (pI), intron number with size, genomic sequence information (Assembly1 Morex ID), derived 5′ upstream of the translational start site and predicted subcellular localization.