Table II.
CHR | SNP | Beta Estimate for SNP | SE | Beta Estimate for ICS Exposure | SE2 | MAF | HWE p value | A1 | A2 | CAMP P_GXE | LOCCS P_GXE | Combined P_GXE |
---|---|---|---|---|---|---|---|---|---|---|---|---|
19 | rs10411428 | 0.042 | 0.0099 | −0.027 | 0.0087 | 0.41 | 0.17 | T | C | 1.41x10−7 | 0.00036 | 1.24x10−9 |
19 | rs11666341 | 0.042 | 0.0098 | −0.027 | 0.0087 | 0.45 | 0.17 | A | G | 1.62x10−7 | 0.00036 | 1.42x10−9 |
19 | rs12460587* | 0.035 | 0.0097 | −0.029 | 0.0085 | 0.33 | 0.22 | G | T | 5.69x10−7 | 0.00018 | 2.43x10−9 |
19 | rs3450 | 0.031 | 0.0099 | −0.030 | 0.0082 | 0.18 | 0.72 | C | T | 1.93x10−6 | 0.00017 | 7.56x10−9 |
19 | rs3752120** | 0.032 | 0.0107 | −0.031 | 0.0090 | 0.15 | 0.21 | T | C | 4.58x10−6 | 0.00050 | 4.81x10−8 |
19 | rs2288884 | 0.033 | 0.0107 | −0.031 | 0.0090 | 0.34 | 0.40 | T | C | 4.91x10−6 | 0.00050 | 5.14x10−8 |
8 | rs6469488 | 0.072 | 0.0170 | −0.032 | 0.0127 | 0.07 | 0.79 | G | A | 5.54x10−7 | 0.77 | 6.70x10−6 |
21 | rs4919929 | 0.062 | 0.0153 | −0.031 | 0.0122 | 0.07 | 0.42 | T | C | 1.96x10−6 | 0.79 | 2.22x10−5 |
3 | rs9868563 | 0.099 | 0.0190 | −0.012 | 0.0138 | 0.06 | 0.10 | T | C | 2.62x10−6 | 0.60 | 2.25x10−5 |
3 | rs4686399 | 0.041 | 0.0094 | −0.015 | 0.0068 | 0.29 | 0.41 | G | A | 1.87x10−6 | 0.87 | 2.33x10−5 |
3 | rs1889261 | 0.084 | 0.0180 | −0.018 | 0.0134 | 0.06 | 0.76 | A | G | 4.14x10−6 | 0.45 | 2.66x10−5 |
2 | rs4233808 | 0.041 | 0.0100 | −0.019 | 0.0089 | 0.16 | 0.69 | G | A | 8.84x10−6 | 0.72 | 8.20x10−5 |
This table summarizes the results of testing and replication in CAMP and LOCCS using the additive model sorted by combined population-based P values. The beta estimate for each SNP and for ICS exposure are provided. CHR=chromosome. SNP=single nucleotide polymorphism. SE= standard error. ICS=inhaled corticosteroid.
located in ZNF841.
located in ZNF432.