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. 2014 Feb 3;5:121–132. doi: 10.3762/bjnano.5.12

Table 3.

Calculation results for the saturated single vacancy structures. The columns show: system identifier; formation energy of the defect; target atom of the calculation (see Figure 3); number of target atoms; calculated 1s binding energy; C 1s BE shift with respect to the calculated C 1s energy of pristine graphene or the O 1s BE shift with respect to the calculated O 1s energy of epoxide/hydroxide functional groups, where applicable.

ID Eform (eV) atom # of atoms 1s BE (eV) BE shift (eV)

SVa 0

SV-H −2.46 C (*) * 283.30 −0.31
C (1) 1 282.11 −1.50
C (2) 2 283.00 −0.61
C (3) 2 282.96 −0.65
C (4) 2 283.65 0.04
C (5) 2 283.24 −0.37
C (6) 2 282.78 −0.83
C (7) 1 282.37 −0.24
C (8) 2 283.09 −0.52

SV=O −4.01 C (*) * 283.47 −0.14
C (1) 1 284.27 0.65
C (2) 2 282.64 −0.97
C (3) 2 283.27 −0.34
C (4) 2 283.65 0.04
C (5) 2 283.42 −0.19
C (6) 2 283.01 −0.60
C (7) 1 282.60 −1.01
C (8) 2 283.26 −0.35
C (9) 1 283.05 −0.56
O 2 528.88 −1.23

SV-OH −1.53 C (*) * 283.35 −0.26
C (1) 1 284.03 0.42
C (2) 2 282.98 −0.63
C (3) 2 283.03 −0.58
C (4) 2 283.55 −0.06
C (5) 2 283.28 −0.33
C (6) 2 282.79 −0.82
C (7) 1 282.41 −1.20
C (8) 2 283.15 −0.46
C (9) 1 283.13 −0.48
O 1 531.93 1.82

SV -O- −4.00 C (*) * 283.20 −0.41
C (1) 2 284.40 0.79
C (2) 2 283.33 −0.28
C (3) 2 282.80 −0.81
C (4) 2 282.99 −0.62
C (5) 1 281.25 −2.06
C (6) 2 283.05 −0.56
C (7) 1 283.23 −0.38
C (8) 2 283.35 −0.26
C (9) 1 282.92 −0.59
O 1 532.10 1.99

SV=O + -O- −8.65 C (*) * 283.61 0.00
C (1) 1 284.59 0.98
C (2) 2 282.98 −0.63
C (3) 2 283.62 0.01
C (4) 2 283.75 0.14
C (5) 2 284.89 1.19
C (6) 2 283.80 0.19
C (7) 1 283.54 −0.07
C (8) 2 283.49 0.12
C (9) 1 283.25 0.36
O (1) 1 529.23 −0.78
O (2) 1 532.57 2.46

SV=2O −4.91 C (*) * 283.28 −0.33
C (1) 1 280.73 −2.88
C (2) 2 282.55 −1.06
C (3) 2 282.90 −0.71
C (4) 2 282.39 −1.22
C (5) 2 284.26 0.65
C (6) 2 282.44 −1.17
C (7) 1 283.32 −0.29
C (8) 2 282.92 −0.69
C (9) 1 283.03 −0.58
O 2 528.29 −1.82

SV-COOH −1.61 C (*) * 283.35 −0.26
C (1) 1 282.38 −1.23
C (2) 2 283.01 −0.60
C (3) 2 282.97 −0.64
C (4) 2 283.65 0.04
C (5) 2 283.24 −0.37
C (6) 2 282.79 −0.82
C (7) 1 282.36 −1.25
C (8) 2 283.08 −0.53
C (9) 1 283.19 −0.42
C (10) 1 285.72 2.11
O (1) 1 529.32 −0.79
O (2) 1 531.83 1.72

aThe formation energies in this table are calculated with respect to the single vacancy structure. See Table 1 for the C 1s values of this configuration.