Table 1.
Step | Temperature/duration | ||||||
---|---|---|---|---|---|---|---|
1st PCR | 2nd PCR | HBV genotyping | rs1082 | rs819 | rs592 | ||
No. of amplification cycles | 35 | 35 | 35 | 33 | 33 | 33 | |
Initial inactivation/denaturation | 95°C/10 min | 95°C/10 min | 95°C/10 min | 95°C/3 min | 95°C/3 min | 95°C/3 min | |
Parameters of amplification | Denaturation | 94°C/30 sec | 94°C/30 sec | 94°C/30 sec | 95°C/30 sec | 95°C/30 sec | 95°C/30 sec |
Annealing | 56°C/30sec | 57°C/30 sec | 57°C/30 sec | 57.9°C/30 sec | 61.4°C/30 sec | 53.7°C/30 sec | |
Extension | 72°C/30 sec | 72°C/30 sec | 72°C/90 sec | 72°C/60 sec | 72°C/60 sec | 72°C/60 sec | |
Final extension | 72°C/10 min | 72°C/10 min | 72°C/10 min | 72°C/1 min | 72°C/1 min | 72°C/1 min | |
Hold | 4°C | 4°C | 4°C | 4°C | 4°C | 4°C |