Table 1. Characteristics of γ-H2AX-enriched sequences.
DNA feature analyzed for overlap | WT (%) | KO (%) |
---|---|---|
Encode clustered TFBS | 35.1 | 55.8* |
DNAse clusters | 45.5 | 62.8* |
CpG islands | 4.5 | 11.4* |
Lamin-associated domains | 33.9 | 1.4* |
Caco-2 CTCF peaks | 6.3 | 11.0* |
HCT116 methyl sequencing peaks | 5.1 | 23.1* |
K562 and MCF7 identified origins of replication | 12.7 | 36.7* |
*P<0.001