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. 2014 Jan 7;289(10):6740–6750. doi: 10.1074/jbc.M113.507707

TABLE 5.

Qualitative assessment of the fraction of ribosomal proteins exhibiting charge segregation

This analysis was performed upon visual inspection of the electrostatic surface area of 193 ribosomal proteins. N.A., not applicable.

Organism Protein Data Bank file Proteins in large ribosomal subunita
Low pI
High pI
Total number of proteins Fraction of proteins exhibiting charge segregation Total number of proteins Fraction of proteins exhibiting charge segregation
% %
Non-halophiles
    Bacteria
        E. coli 2AW4 2 100b 27 85
        T. thermophilus 3I8I 2 100b 29 90
        D. radiodurans 2ZJR 1 100b 24 83
    Eukaryota
        S. cerevisiae 3U5E 5c 80 37 70
        T. thermophila 4A1D 4A1E 0 N.A. 39 62

Halophiles
    Halophilic archaea
        H. marismortui 2QA4 18 100 9 100

a Note that not all existing ribosomal proteins are listed in the Protein Data Bank files (20) used as source of three-dimensional coordinates.

b Note the small sample size.

c Protein Data Bank files for P0, P1α, and P2β are chains q, r, and s of 4B6A (42), respectively.