Table 3.

Differential recoveries of the insertion mutagens in compartments of the rice genome (Updated from Droc et al.2013)

			Mapped sequence		Intergenic		Genic		Promoter		5 UTR		Exon		Intron		3 UTR
Mutagen	Source	Nb of sequences	Nb	%	Nb	%	Nb	%	Nb	%	Nb	%	Nb	%	Nb	%	Nb	%
Ds	CSIRO	611	591	96.7	160	27.1	432	73.1	98	22.7	19	4.4	175	40.5	88	20.4	52	12.0
Ds	OSTID	1380	1373	99.5	402	29.3	972	70.8	212	21.8	34	3.5	371	38.2	210	21.6	145	14.9
Ds	PMBBRC	1072	1053	98.2	263	25.0	791	75.1	175	22.1	29	3.7	310	39.2	176	22.3	101	12.8
Ds	UCD	1122	1101	98.1	422	38.3	680	61.8	140	20.6	42	6.2	248	36.5	166	24.4	84	12.4
Ds	UCD-RGT	3719	3661	98.4	1244	34.0	2418	66.0	686	28.4	125	5.2	714	29.5	568	23.5	325	13.4
dSpm	UCD	12889	11921	92.5	6238	52.3	5684	47.7	1622	28.5	128	2.3	1365	24.0	1160	20.4	1409	24.8
T-DNA	OTL	26788	24716	92.3	11336	45.9	13380	54.1	4490	33.6	618	4.6	2520	18.8	3461	25.9	2291	17.1
T-DNA	Postech	107171	106011	98.9	37232	35.1	68779	64.9	22308	32.4	3600	5.2	14505	21.1	17799	25.9	10567	15.4
T-DNA	RMD	65085	31276	48.1	16258	52.0	15018	48.0	5002	33.3	720	4.8	2865	19.1	3881	25.8	2550	17.0
T-DNA	SHIP	12614	9682	76.8	3786	39.1	5896	60.9	2079	35.3	286	4.9	989	16.8	1289	21.9	1253	21.3
T-DNA	TRIM	38840	38302	98.6	14195	37.1	24107	62.9	8230	34.1	1694	7.0	5196	21.6	5342	22.2	3645	15.1
Tos17	NIAS	77740	77683	99.9	10029	12.9	67654	87.1	6744	10.0	1349	2.0	26985	39.9	27239	40.3	5337	7.9
Tos17	OTL	14284	14160	99.1	1937	13.7	12223	86.3	1014	8.3	196	1.6	5644	46.2	4414	36.1	955	7.8
Tos17	RMD	19062	14732	77.3	5905	40.1	8827	59.9	945	10.7	156	1.8	3114	35.3	3825	43.3	787	8.9
	TOTAL	382377	336262		109407		226861	67.47	53745	15.98	8996	2.68	65001	19.33	69618	20.70	29501	8.77