Table 2.
Identification | Sequencea | Nb Occb | P-value |
---|---|---|---|
HV chs-Unit_1_m1 | ACCTAACCCGC | 4c | 0.006 |
LE L-box | AGATTAACCAAC | 4d | 0.01 |
AT CAG motif | GAAAGGCAGAC | 4e | 0.026 |
AS GT1 motif | GGTTAAT | 4 | 0.04 |
As indicated in the annotation file of MotifScaner file.
Number of occurrences.
Variations in these motifs are identified as “ACCTAAGCGGC” in AtPDF1.2a, AtPDF1.2b and AhPDF1.2b and “ACCAGCCCCGC” in AtPDF1.2c.
Variations in these motifs are identified as “AGATTAACCAGC” in all four JA-responsive PDF1s, i.e.: AtPDF1.2a, AtPDF1.2b, AtPDF1.3, and AhPDF1.2b.
Variations in these motifs are identified as “GAAGGTCAGAC” in AtPDF1.2a, AtPDF1.2b and AhPDF1.2b and “GAAAGGCTGCC” in AtPDF1.2c.