Table 2.

RNA-folding energies and composition of RNA transcripts

Transcript	MFEa	MFED (%)b	GORSc	G + C	CpGd	UpAe
CaCV	−77.0	16.0	Yes	0.468	0.766	0.505
PLRV	−84.2	13.6	Yes	0.508	0.809	0.652
HPgV	−115.1	12.0	Yes	0.594	0.692	0.575
TMEV	−73.7	6.5	Yes	0.502	0.586	0.590
PEMV	−93.7	6.5	Yes	0.559	0.735	0.758
MNV3	−99.1	6.3	Yes	0.579	0.605	0.455
SFV	−84.4	5.9	Yes	0.526	0.853	0.816
HCV	−101.9	5.5	Yes	0.588	0.686	0.802
MNV1	−96.2	4.0	Yes	0.572	0.605	0.500
TBE	−93.8	2.8	No	0.549	0.527	0.369
MeV	−70.2	1.3	No	0.534	0.581	0.601
RV	−118.2	1.0	No	0.716	1.130	0.678
SeV	−72.0	0.8	No	0.47	0.517	0.789
PV	−70.3	0.7	No	0.475	0.568	0.855
HPeV	−62.2	0.5	No	0.392	0.225	0.678
SiV	−71.6	0.1	No	0.513	0.863	0.782
HAV	−61.7	−2.1	No	0.366	0.069	0.564
BV	−51.2	−3.6	No	0.335	0.258	0.802

^aMinimum folding energy (Kcal/mol).

^bMFE difference from sequence order randomized control.

^cThreshold of 3% MFED value.

^dObserved to expected value: .

^eObserved to expected value: .