Table 2.
CRISPR spacer sequences present in genomes of TP-J34 and TP-778La.
| Sequence ID/S. thermophilus strain phage | Spacer sequenceb | Identity | E-value |
|---|---|---|---|
| TP-J34 | |||
| NC_008532_5_4 /LMD-9 | agagtacaatattgtcctcattggagacac 5882 5911 | 1 | 7e-07 |
| NC_008532_4_3 /LMD-9 | catcataggcggaactggtaggatgtacac 44252 44281 | 1 | 7e-07 |
| NC_006449_1_31 NC_006449_1_5 /CNRZ1066 | gttggcaatgcaaacaacctttatgaaccg 40182 40211 | 1 | 7e-07 |
| NC_017563_1_29 /NDO3 | gaaagaatcggtcttctagatggattccaa 5245 5274 | 0.97 | 1e-04 |
| NC_006449_1_6 /CNRZ1066 | aaaggtggaacgttatcgcaaggaaataaa 33041 33070 | 0.97 | 1e-04 |
| NC_006449_1_41 /CNRZ1066 | atttgaaaaatgcacaacagcgtttgata 38388 38416 | 0.97 | 4e-04 |
| TP-778L | |||
| NC_017563_3_3 /ND03 | cggacagcgataaatacactctatacagaga 12541 12571 | 1 | 2e-07 |
| NC_017927_3_4 /MN-ZLW-002 | attgacctattcaatgtatgggtcacgtaa 38358 38387 | 1 | 7e-07 |
| NC_008532_2_3 /LMD-9 | agtaatgatggtcggttatttttcagacat 36793 36822 | 0.97 | 1e-04 |
| NC_006448_1_17 /LMG 18311 | cattaaatcgcttgaagcagacattgaagc 4072 4101 | 0.97 | 1e-04 |
| NC_008532_2_16 /LMD-9 | aacagttactattaatcacgattcc 35406 35430 | 1 | 4e-04 |
a
Only sequences with E-values < 0.001 are shown.
b
The phage sequences are shown with positions of first and last nucleotide.