Table 1.
S CDS | M CDS | L CDS | ||||
---|---|---|---|---|---|---|
Virus (strain) | 1290 nt | 429 aa | 3402 nt | 1133 aa | 6456 nt | 2151 aa |
Hantaviruses associated with Murinae | ||||||
Jurong (TJK/O6 [RT49]) | 84.7 | 97.4 | 79.7 | 93.6 | NA | NA |
Jurong (TJK/O6 [RT50]) | 84.7 | 97.4 | 79.7 | 93.6 | NA | NA |
Serang (Rt60/2000) | 83.9 | 98.1 | NA | NA | NA | NA |
Thailand (741 for S; 749 for M and L) | 83.0 | 97.0 | 79.7 | 91.7 | NA | NA |
Thailand (N-R/Bi0017/2004) | 82.7 | 97.0 | NA | NA | NA | NA |
Seoul (HR 80-39) | 75.3 | 86.5 | 74.6 | 83.1 | 76.3 | 88.9 |
Hantaan (76–118) | 75.0 | 84.6 | 71.1 | 77.8 | 74.4 | 84.9 |
Da-Bie-Shang (NC167) | 75.0 | 84.8 | 71.0 | 76.6 | 74.9 | 85.4 |
Amur (Khekhtsir/AP209/2005) | 75.5 | 85.3 | 70.6 | 77.8 | 75.2 | 85.5 |
Soochong (SC-1) | 74.7 | 85.1 | 71.1 | 77.7 | 74.5 | 85.3 |
Dobrava-Belgrade (GRW/Aa) | 73.3 | 84.4 | 71.4 | 77.1 | 75.0 | 85.9 |
Sangassou (SA14) | 73.1 | 83.0 | 71.2 | 78.2 | 74.6 | 84.4 |
Saaremaa (160V) | 72.9 | 82.8 | 70.8 | 77.1 | 75.2 | 86.3 |
Hantavirus associated with Arvicolinae | ||||||
Tula (Moravia/5302Ma/94) | 62.4 | 61.8 | 58.6 | 54.4 | 66.5 | 68.6 |
Malacky (Ma32/94) | 62.3 | 62.2 | NA | NA | NA | NA |
Hantavirus associated with soricomorphs | ||||||
Jemez Springs (MSB144475) | 63.9 | 61.8 | NA | NA | NA | NA |
Seewis (mp70) | 62.1 | 59.4 | NA | NA | NA | NA |
Qiandao-Lake (YN05-284) | 64.8 | 61.3 | NA | NA | NA | NA |
Kenkeme (MSB148794) | 61.7 | 59.0 | NA | NA | NA | NA |
CDS, coding DNA sequences; nt, nucleotides; aa, amino acids; NA, corresponding complete sequence not available.