Table 1.
Descriptive statistics for Hemileia vastatrix 454 pyrosequenced cDNA libraries of germinated urediniospores (gU) and appressoria (Ap).
| Library | gU | Ap |
|---|---|---|
| Number of bases | 67773266 | 45631100 |
| Number of sequences | 269199 | 186608 |
| Mean size of reads (bp) | 251.8 | 244.5 |
| Number of contigs | 4267 | 3626 |
| Mean size of contigs (bp) | 676 | 632 |
| Size of contigs (bp)* | 188/546/1293/3754 | 192/530/1139/4860 |
| Mean number of reads per contig | 48.5 | 32.2 |
| Reads per contig* | 4/10/63/3326 | 4/9/52/2077 |
| Mean relative abundance (Ra) | 0.1456 | 0.0797 |
| Relative abundance (Ra)* | 0.0087/0.0190/0.0967/26.72 | 0.0085/0.0187/0.0777/14.41 |
*
Values correspond to 10/50/90/100 percentiles.