Table 2. Characteristics of novel mutations in POLG.
Variant | Conservation of the amino acid | Domain | Occurrence at structure/function important regions | Polarity change | Charge change | Grantham score | SIFT prediction | PolyPhen-2 prediction | Found in EVS or 1000 genome project databases | Found in 100 controlsa | Familial segregation |
---|---|---|---|---|---|---|---|---|---|---|---|
p.Met464Thr | Yes | Pol | Subunit interface | NP to P | No | 81 | Tolerated | Probably damaging | No | No | Yes |
p.Lys768Glu | Yes | L | Globular intrinsic processivity subdomain | No | Basic to acid | 56 | Damaging | Probably damaging | No | No | Yes |
p.Leu79Phe | Yes | N-terminal domain | Adjacent to DNA-binding domain | No | No | 22 | Damaging | Probably damaging | No | No | Yes |
p.Ser1080Ile | Yes | Pol | Small subdomain (residues 1050–1095), partially blocks the DNA-binding channel | P to NP | No | 142 | Damaging | Possibly damaging | No | No | Yes |
p.Gln975* | Stop | Pol | Loss of the half C-terminal part of the polymerase domain | NA | NA | NA | NA | NA | No | No | NA |
Abbreviations: EVS, exome variant server; Pol, polymerase domain; NP, non-polar; P, polar; NA, not available; L, linker domain; Exo, exonuclease domain.
Geographically matched healthy controls.